Cargando…
Role of Mineral Surfaces in Prebiotic Chemical Evolution. In Silico Quantum Mechanical Studies
There is a consensus that the interaction of organic molecules with the surfaces of naturally-occurring minerals might have played a crucial role in chemical evolution and complexification in a prebiotic era. The hurdle of an overly diluted primordial soup occurring in the free ocean may have been o...
Autores principales: | , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6463156/ https://www.ncbi.nlm.nih.gov/pubmed/30658501 http://dx.doi.org/10.3390/life9010010 |
_version_ | 1783410714447183872 |
---|---|
author | Rimola, Albert Sodupe, Mariona Ugliengo, Piero |
author_facet | Rimola, Albert Sodupe, Mariona Ugliengo, Piero |
author_sort | Rimola, Albert |
collection | PubMed |
description | There is a consensus that the interaction of organic molecules with the surfaces of naturally-occurring minerals might have played a crucial role in chemical evolution and complexification in a prebiotic era. The hurdle of an overly diluted primordial soup occurring in the free ocean may have been overcome by the adsorption and concentration of relevant molecules on the surface of abundant minerals at the sea shore. Specific organic–mineral interactions could, at the same time, organize adsorbed molecules in well-defined orientations and activate them toward chemical reactions, bringing to an increase in chemical complexity. As experimental approaches cannot easily provide details at atomic resolution, the role of in silico computer simulations may fill that gap by providing structures and reactive energy profiles at the organic–mineral interface regions. Accordingly, numerous computational studies devoted to prebiotic chemical evolution induced by organic–mineral interactions have been proposed. The present article aims at reviewing recent in silico works, mainly focusing on prebiotic processes occurring on the mineral surfaces of clays, iron sulfides, titanium dioxide, and silica and silicates simulated through quantum mechanical methods based on the density functional theory (DFT). The DFT is the most accurate way in which chemists may address the behavior of the molecular world through large models mimicking chemical complexity. A perspective on possible future scenarios of research using in silico techniques is finally proposed. |
format | Online Article Text |
id | pubmed-6463156 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-64631562019-04-22 Role of Mineral Surfaces in Prebiotic Chemical Evolution. In Silico Quantum Mechanical Studies Rimola, Albert Sodupe, Mariona Ugliengo, Piero Life (Basel) Review There is a consensus that the interaction of organic molecules with the surfaces of naturally-occurring minerals might have played a crucial role in chemical evolution and complexification in a prebiotic era. The hurdle of an overly diluted primordial soup occurring in the free ocean may have been overcome by the adsorption and concentration of relevant molecules on the surface of abundant minerals at the sea shore. Specific organic–mineral interactions could, at the same time, organize adsorbed molecules in well-defined orientations and activate them toward chemical reactions, bringing to an increase in chemical complexity. As experimental approaches cannot easily provide details at atomic resolution, the role of in silico computer simulations may fill that gap by providing structures and reactive energy profiles at the organic–mineral interface regions. Accordingly, numerous computational studies devoted to prebiotic chemical evolution induced by organic–mineral interactions have been proposed. The present article aims at reviewing recent in silico works, mainly focusing on prebiotic processes occurring on the mineral surfaces of clays, iron sulfides, titanium dioxide, and silica and silicates simulated through quantum mechanical methods based on the density functional theory (DFT). The DFT is the most accurate way in which chemists may address the behavior of the molecular world through large models mimicking chemical complexity. A perspective on possible future scenarios of research using in silico techniques is finally proposed. MDPI 2019-01-17 /pmc/articles/PMC6463156/ /pubmed/30658501 http://dx.doi.org/10.3390/life9010010 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Review Rimola, Albert Sodupe, Mariona Ugliengo, Piero Role of Mineral Surfaces in Prebiotic Chemical Evolution. In Silico Quantum Mechanical Studies |
title | Role of Mineral Surfaces in Prebiotic Chemical Evolution. In Silico Quantum Mechanical Studies |
title_full | Role of Mineral Surfaces in Prebiotic Chemical Evolution. In Silico Quantum Mechanical Studies |
title_fullStr | Role of Mineral Surfaces in Prebiotic Chemical Evolution. In Silico Quantum Mechanical Studies |
title_full_unstemmed | Role of Mineral Surfaces in Prebiotic Chemical Evolution. In Silico Quantum Mechanical Studies |
title_short | Role of Mineral Surfaces in Prebiotic Chemical Evolution. In Silico Quantum Mechanical Studies |
title_sort | role of mineral surfaces in prebiotic chemical evolution. in silico quantum mechanical studies |
topic | Review |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6463156/ https://www.ncbi.nlm.nih.gov/pubmed/30658501 http://dx.doi.org/10.3390/life9010010 |
work_keys_str_mv | AT rimolaalbert roleofmineralsurfacesinprebioticchemicalevolutioninsilicoquantummechanicalstudies AT sodupemariona roleofmineralsurfacesinprebioticchemicalevolutioninsilicoquantummechanicalstudies AT ugliengopiero roleofmineralsurfacesinprebioticchemicalevolutioninsilicoquantummechanicalstudies |