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Structure and Function of Tryptophan–Tyrosine Dyads in Biomimetic β Hairpins
[Image: see text] Tyrosine–tryptophan (YW) dyads are ubiquitous structural motifs in enzymes and play roles in proton-coupled electron transfer (PCET) and, possibly, protection from oxidative stress. Here, we describe the function of YW dyads in de novo designed 18-mer, β hairpins. In Peptide M, a Y...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical
Society
2019
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6463897/ https://www.ncbi.nlm.nih.gov/pubmed/30888824 http://dx.doi.org/10.1021/acs.jpcb.8b12452 |
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author | McCaslin, Tyler G. Pagba, Cynthia V. Chi, San-Hui Hwang, Hyea J. Gumbart, James C. Perry, Joseph W. Olivieri, Cristina Porcelli, Fernando Veglia, Gianluigi Guo, Zhanjun McDaniel, Miranda Barry, Bridgette A. |
author_facet | McCaslin, Tyler G. Pagba, Cynthia V. Chi, San-Hui Hwang, Hyea J. Gumbart, James C. Perry, Joseph W. Olivieri, Cristina Porcelli, Fernando Veglia, Gianluigi Guo, Zhanjun McDaniel, Miranda Barry, Bridgette A. |
author_sort | McCaslin, Tyler G. |
collection | PubMed |
description | [Image: see text] Tyrosine–tryptophan (YW) dyads are ubiquitous structural motifs in enzymes and play roles in proton-coupled electron transfer (PCET) and, possibly, protection from oxidative stress. Here, we describe the function of YW dyads in de novo designed 18-mer, β hairpins. In Peptide M, a YW dyad is formed between W14 and Y5. A UV hypochromic effect and an excitonic Cotton signal are observed, in addition to singlet, excited state (W*) and fluorescence emission spectral shifts. In a second Peptide, Peptide MW, a Y5–W13 dyad is formed diagonally across the strand and distorts the backbone. On a picosecond timescale, the W* excited-state decay kinetics are similar in all peptides but are accelerated relative to amino acids in solution. In Peptide MW, the W* spectrum is consistent with increased conformational flexibility. In Peptide M and MW, the electron paramagnetic resonance spectra obtained after UV photolysis are characteristic of tyrosine and tryptophan radicals at 160 K. Notably, at pH 9, the radical photolysis yield is decreased in Peptide M and MW, compared to that in a tyrosine and tryptophan mixture. This protective effect is not observed at pH 11 and is not observed in peptides containing a tryptophan–histidine dyad or tryptophan alone. The YW dyad protective effect is attributed to an increase in the radical recombination rate. This increase in rate can be facilitated by hydrogen-bonding interactions, which lower the barrier for the PCET reaction at pH 9. These results suggest that the YW dyad structural motif promotes radical quenching under conditions of reactive oxygen stress. |
format | Online Article Text |
id | pubmed-6463897 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | American Chemical
Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-64638972020-03-19 Structure and Function of Tryptophan–Tyrosine Dyads in Biomimetic β Hairpins McCaslin, Tyler G. Pagba, Cynthia V. Chi, San-Hui Hwang, Hyea J. Gumbart, James C. Perry, Joseph W. Olivieri, Cristina Porcelli, Fernando Veglia, Gianluigi Guo, Zhanjun McDaniel, Miranda Barry, Bridgette A. J Phys Chem B [Image: see text] Tyrosine–tryptophan (YW) dyads are ubiquitous structural motifs in enzymes and play roles in proton-coupled electron transfer (PCET) and, possibly, protection from oxidative stress. Here, we describe the function of YW dyads in de novo designed 18-mer, β hairpins. In Peptide M, a YW dyad is formed between W14 and Y5. A UV hypochromic effect and an excitonic Cotton signal are observed, in addition to singlet, excited state (W*) and fluorescence emission spectral shifts. In a second Peptide, Peptide MW, a Y5–W13 dyad is formed diagonally across the strand and distorts the backbone. On a picosecond timescale, the W* excited-state decay kinetics are similar in all peptides but are accelerated relative to amino acids in solution. In Peptide MW, the W* spectrum is consistent with increased conformational flexibility. In Peptide M and MW, the electron paramagnetic resonance spectra obtained after UV photolysis are characteristic of tyrosine and tryptophan radicals at 160 K. Notably, at pH 9, the radical photolysis yield is decreased in Peptide M and MW, compared to that in a tyrosine and tryptophan mixture. This protective effect is not observed at pH 11 and is not observed in peptides containing a tryptophan–histidine dyad or tryptophan alone. The YW dyad protective effect is attributed to an increase in the radical recombination rate. This increase in rate can be facilitated by hydrogen-bonding interactions, which lower the barrier for the PCET reaction at pH 9. These results suggest that the YW dyad structural motif promotes radical quenching under conditions of reactive oxygen stress. American Chemical Society 2019-03-19 2019-04-04 /pmc/articles/PMC6463897/ /pubmed/30888824 http://dx.doi.org/10.1021/acs.jpcb.8b12452 Text en Copyright © 2019 American Chemical Society This is an open access article published under an ACS AuthorChoice License (http://pubs.acs.org/page/policy/authorchoice_termsofuse.html) , which permits copying and redistribution of the article or any adaptations for non-commercial purposes. |
spellingShingle | McCaslin, Tyler G. Pagba, Cynthia V. Chi, San-Hui Hwang, Hyea J. Gumbart, James C. Perry, Joseph W. Olivieri, Cristina Porcelli, Fernando Veglia, Gianluigi Guo, Zhanjun McDaniel, Miranda Barry, Bridgette A. Structure and Function of Tryptophan–Tyrosine Dyads in Biomimetic β Hairpins |
title | Structure and Function of Tryptophan–Tyrosine
Dyads in Biomimetic β Hairpins |
title_full | Structure and Function of Tryptophan–Tyrosine
Dyads in Biomimetic β Hairpins |
title_fullStr | Structure and Function of Tryptophan–Tyrosine
Dyads in Biomimetic β Hairpins |
title_full_unstemmed | Structure and Function of Tryptophan–Tyrosine
Dyads in Biomimetic β Hairpins |
title_short | Structure and Function of Tryptophan–Tyrosine
Dyads in Biomimetic β Hairpins |
title_sort | structure and function of tryptophan–tyrosine
dyads in biomimetic β hairpins |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6463897/ https://www.ncbi.nlm.nih.gov/pubmed/30888824 http://dx.doi.org/10.1021/acs.jpcb.8b12452 |
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