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Metabolomic profiles differ among unique genotypes of a threatened Caribbean coral

Global threats to reefs require urgent efforts to resolve coral attributes that affect survival in a changing environment. Genetically different individuals of the same coral species are known to exhibit different responses to the same environmental conditions. New information on coral physiology, p...

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Autores principales: Lohr, Kathryn E., Khattri, Ram B., Guingab-Cagmat, Joy, Camp, Emma F., Merritt, Matthew E., Garrett, Timothy J., Patterson, Joshua T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6465396/
https://www.ncbi.nlm.nih.gov/pubmed/30988456
http://dx.doi.org/10.1038/s41598-019-42434-0
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author Lohr, Kathryn E.
Khattri, Ram B.
Guingab-Cagmat, Joy
Camp, Emma F.
Merritt, Matthew E.
Garrett, Timothy J.
Patterson, Joshua T.
author_facet Lohr, Kathryn E.
Khattri, Ram B.
Guingab-Cagmat, Joy
Camp, Emma F.
Merritt, Matthew E.
Garrett, Timothy J.
Patterson, Joshua T.
author_sort Lohr, Kathryn E.
collection PubMed
description Global threats to reefs require urgent efforts to resolve coral attributes that affect survival in a changing environment. Genetically different individuals of the same coral species are known to exhibit different responses to the same environmental conditions. New information on coral physiology, particularly as it relates to genotype, could aid in unraveling mechanisms that facilitate coral survival in the face of stressors. Metabolomic profiling detects a large subset of metabolites in an organism, and, when linked to metabolic pathways, can provide a snapshot of an organism’s physiological state. Identifying metabolites associated with desirable, genotype-specific traits could improve coral selection for restoration and other interventions. A key step toward this goal is determining whether intraspecific variation in coral metabolite profiles can be detected for species of interest, however little information exists to illustrate such differences. To address this gap, we applied untargeted (1)H-NMR and LC-MS metabolomic profiling to three genotypes of the threatened coral Acropora cervicornis. Both methods revealed distinct metabolite “fingerprints” for each genotype examined. A number of metabolites driving separation among genotypes were identified or putatively annotated. Pathway analysis suggested differences in protein synthesis among genotypes. For the first time, these data illustrate intraspecific variation in metabolomic profiles for corals in a common garden. Our results contribute to the growing body of work on coral metabolomics and suggest future work could identify specific links between phenotype and metabolite profile in corals.
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spelling pubmed-64653962019-04-18 Metabolomic profiles differ among unique genotypes of a threatened Caribbean coral Lohr, Kathryn E. Khattri, Ram B. Guingab-Cagmat, Joy Camp, Emma F. Merritt, Matthew E. Garrett, Timothy J. Patterson, Joshua T. Sci Rep Article Global threats to reefs require urgent efforts to resolve coral attributes that affect survival in a changing environment. Genetically different individuals of the same coral species are known to exhibit different responses to the same environmental conditions. New information on coral physiology, particularly as it relates to genotype, could aid in unraveling mechanisms that facilitate coral survival in the face of stressors. Metabolomic profiling detects a large subset of metabolites in an organism, and, when linked to metabolic pathways, can provide a snapshot of an organism’s physiological state. Identifying metabolites associated with desirable, genotype-specific traits could improve coral selection for restoration and other interventions. A key step toward this goal is determining whether intraspecific variation in coral metabolite profiles can be detected for species of interest, however little information exists to illustrate such differences. To address this gap, we applied untargeted (1)H-NMR and LC-MS metabolomic profiling to three genotypes of the threatened coral Acropora cervicornis. Both methods revealed distinct metabolite “fingerprints” for each genotype examined. A number of metabolites driving separation among genotypes were identified or putatively annotated. Pathway analysis suggested differences in protein synthesis among genotypes. For the first time, these data illustrate intraspecific variation in metabolomic profiles for corals in a common garden. Our results contribute to the growing body of work on coral metabolomics and suggest future work could identify specific links between phenotype and metabolite profile in corals. Nature Publishing Group UK 2019-04-15 /pmc/articles/PMC6465396/ /pubmed/30988456 http://dx.doi.org/10.1038/s41598-019-42434-0 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Lohr, Kathryn E.
Khattri, Ram B.
Guingab-Cagmat, Joy
Camp, Emma F.
Merritt, Matthew E.
Garrett, Timothy J.
Patterson, Joshua T.
Metabolomic profiles differ among unique genotypes of a threatened Caribbean coral
title Metabolomic profiles differ among unique genotypes of a threatened Caribbean coral
title_full Metabolomic profiles differ among unique genotypes of a threatened Caribbean coral
title_fullStr Metabolomic profiles differ among unique genotypes of a threatened Caribbean coral
title_full_unstemmed Metabolomic profiles differ among unique genotypes of a threatened Caribbean coral
title_short Metabolomic profiles differ among unique genotypes of a threatened Caribbean coral
title_sort metabolomic profiles differ among unique genotypes of a threatened caribbean coral
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6465396/
https://www.ncbi.nlm.nih.gov/pubmed/30988456
http://dx.doi.org/10.1038/s41598-019-42434-0
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