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Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery
The presence of pathologies in magnetic resonance (MR) brain images causes challenges in various image analysis areas, such as registration, atlas construction and atlas-based segmentation. We propose a novel method for the simultaneous recovery and segmentation of pathological MR brain images. Low-...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6465608/ https://www.ncbi.nlm.nih.gov/pubmed/31024244 http://dx.doi.org/10.3389/fnins.2019.00333 |
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author | Lin, Chuanlu Wang, Yi Wang, Tianfu Ni, Dong |
author_facet | Lin, Chuanlu Wang, Yi Wang, Tianfu Ni, Dong |
author_sort | Lin, Chuanlu |
collection | PubMed |
description | The presence of pathologies in magnetic resonance (MR) brain images causes challenges in various image analysis areas, such as registration, atlas construction and atlas-based segmentation. We propose a novel method for the simultaneous recovery and segmentation of pathological MR brain images. Low-rank and sparse decomposition (LSD) approaches have been widely used in this field, decomposing pathological images into (1) low-rank components as recovered images, and (2) sparse components as pathological segmentation. However, conventional LSD approaches often fail to produce recovered images reliably, due to the lack of constraint between low-rank and sparse components. To tackle this problem, we propose a transformed low-rank and structured sparse decomposition (TLS(2)D) method. The proposed TLS(2)D integrates the structured sparse constraint, LSD and image alignment into a unified scheme, which is robust for distinguishing pathological regions. Furthermore, the well recovered images can be obtained using TLS(2)D with the combined structured sparse and computed image saliency as the adaptive sparsity constraint. The efficacy of the proposed method is verified on synthetic and real MR brain tumor images. Experimental results demonstrate that our method can effectively provide satisfactory image recovery and tumor segmentation. |
format | Online Article Text |
id | pubmed-6465608 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-64656082019-04-25 Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery Lin, Chuanlu Wang, Yi Wang, Tianfu Ni, Dong Front Neurosci Neuroscience The presence of pathologies in magnetic resonance (MR) brain images causes challenges in various image analysis areas, such as registration, atlas construction and atlas-based segmentation. We propose a novel method for the simultaneous recovery and segmentation of pathological MR brain images. Low-rank and sparse decomposition (LSD) approaches have been widely used in this field, decomposing pathological images into (1) low-rank components as recovered images, and (2) sparse components as pathological segmentation. However, conventional LSD approaches often fail to produce recovered images reliably, due to the lack of constraint between low-rank and sparse components. To tackle this problem, we propose a transformed low-rank and structured sparse decomposition (TLS(2)D) method. The proposed TLS(2)D integrates the structured sparse constraint, LSD and image alignment into a unified scheme, which is robust for distinguishing pathological regions. Furthermore, the well recovered images can be obtained using TLS(2)D with the combined structured sparse and computed image saliency as the adaptive sparsity constraint. The efficacy of the proposed method is verified on synthetic and real MR brain tumor images. Experimental results demonstrate that our method can effectively provide satisfactory image recovery and tumor segmentation. Frontiers Media S.A. 2019-04-09 /pmc/articles/PMC6465608/ /pubmed/31024244 http://dx.doi.org/10.3389/fnins.2019.00333 Text en Copyright © 2019 Lin, Wang, Wang and Ni. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Neuroscience Lin, Chuanlu Wang, Yi Wang, Tianfu Ni, Dong Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery |
title | Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery |
title_full | Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery |
title_fullStr | Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery |
title_full_unstemmed | Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery |
title_short | Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery |
title_sort | low-rank based image analyses for pathological mr image segmentation and recovery |
topic | Neuroscience |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6465608/ https://www.ncbi.nlm.nih.gov/pubmed/31024244 http://dx.doi.org/10.3389/fnins.2019.00333 |
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