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Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery

The presence of pathologies in magnetic resonance (MR) brain images causes challenges in various image analysis areas, such as registration, atlas construction and atlas-based segmentation. We propose a novel method for the simultaneous recovery and segmentation of pathological MR brain images. Low-...

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Detalles Bibliográficos
Autores principales: Lin, Chuanlu, Wang, Yi, Wang, Tianfu, Ni, Dong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6465608/
https://www.ncbi.nlm.nih.gov/pubmed/31024244
http://dx.doi.org/10.3389/fnins.2019.00333
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author Lin, Chuanlu
Wang, Yi
Wang, Tianfu
Ni, Dong
author_facet Lin, Chuanlu
Wang, Yi
Wang, Tianfu
Ni, Dong
author_sort Lin, Chuanlu
collection PubMed
description The presence of pathologies in magnetic resonance (MR) brain images causes challenges in various image analysis areas, such as registration, atlas construction and atlas-based segmentation. We propose a novel method for the simultaneous recovery and segmentation of pathological MR brain images. Low-rank and sparse decomposition (LSD) approaches have been widely used in this field, decomposing pathological images into (1) low-rank components as recovered images, and (2) sparse components as pathological segmentation. However, conventional LSD approaches often fail to produce recovered images reliably, due to the lack of constraint between low-rank and sparse components. To tackle this problem, we propose a transformed low-rank and structured sparse decomposition (TLS(2)D) method. The proposed TLS(2)D integrates the structured sparse constraint, LSD and image alignment into a unified scheme, which is robust for distinguishing pathological regions. Furthermore, the well recovered images can be obtained using TLS(2)D with the combined structured sparse and computed image saliency as the adaptive sparsity constraint. The efficacy of the proposed method is verified on synthetic and real MR brain tumor images. Experimental results demonstrate that our method can effectively provide satisfactory image recovery and tumor segmentation.
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spelling pubmed-64656082019-04-25 Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery Lin, Chuanlu Wang, Yi Wang, Tianfu Ni, Dong Front Neurosci Neuroscience The presence of pathologies in magnetic resonance (MR) brain images causes challenges in various image analysis areas, such as registration, atlas construction and atlas-based segmentation. We propose a novel method for the simultaneous recovery and segmentation of pathological MR brain images. Low-rank and sparse decomposition (LSD) approaches have been widely used in this field, decomposing pathological images into (1) low-rank components as recovered images, and (2) sparse components as pathological segmentation. However, conventional LSD approaches often fail to produce recovered images reliably, due to the lack of constraint between low-rank and sparse components. To tackle this problem, we propose a transformed low-rank and structured sparse decomposition (TLS(2)D) method. The proposed TLS(2)D integrates the structured sparse constraint, LSD and image alignment into a unified scheme, which is robust for distinguishing pathological regions. Furthermore, the well recovered images can be obtained using TLS(2)D with the combined structured sparse and computed image saliency as the adaptive sparsity constraint. The efficacy of the proposed method is verified on synthetic and real MR brain tumor images. Experimental results demonstrate that our method can effectively provide satisfactory image recovery and tumor segmentation. Frontiers Media S.A. 2019-04-09 /pmc/articles/PMC6465608/ /pubmed/31024244 http://dx.doi.org/10.3389/fnins.2019.00333 Text en Copyright © 2019 Lin, Wang, Wang and Ni. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neuroscience
Lin, Chuanlu
Wang, Yi
Wang, Tianfu
Ni, Dong
Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery
title Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery
title_full Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery
title_fullStr Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery
title_full_unstemmed Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery
title_short Low-Rank Based Image Analyses for Pathological MR Image Segmentation and Recovery
title_sort low-rank based image analyses for pathological mr image segmentation and recovery
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6465608/
https://www.ncbi.nlm.nih.gov/pubmed/31024244
http://dx.doi.org/10.3389/fnins.2019.00333
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