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The First Complete Genome Sequence of a Novel Tetrastichus brontispae RNA Virus-1 (TbRV-1)
The complete sequence of a novel RNA virus isolated from Tetrastichus brontispae (TbRV-1) was determined to be 12,239 nucleotides in length with five non-overlapping, linearly arranged coding sequences (CDS), potentially encoding nucleoproteins, hypothetical proteins, matrix proteins, glycoproteins,...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6466307/ https://www.ncbi.nlm.nih.gov/pubmed/30871248 http://dx.doi.org/10.3390/v11030257 |
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author | Meng, E Tang, Baozhen Sanchez-Garcia, Francisco Javier Qiao, Ting Fu, Lang Wang, Yu Hou, You-Ming Wu, Jiang-Lin Chen, Zhi-Ming |
author_facet | Meng, E Tang, Baozhen Sanchez-Garcia, Francisco Javier Qiao, Ting Fu, Lang Wang, Yu Hou, You-Ming Wu, Jiang-Lin Chen, Zhi-Ming |
author_sort | Meng, E |
collection | PubMed |
description | The complete sequence of a novel RNA virus isolated from Tetrastichus brontispae (TbRV-1) was determined to be 12,239 nucleotides in length with five non-overlapping, linearly arranged coding sequences (CDS), potentially encoding nucleoproteins, hypothetical proteins, matrix proteins, glycoproteins, and RNA-dependent RNA polymerases. Sequence analysis indicated that the RNA-dependent RNA polymerase of TbRV-1 shares a 65% nucleotide and 67% amino acid sequence identity with Hubei dimarhabdovirus 2, suggesting that TbRV-1 is a member of the dimarhabdovirus supergroup. This corresponded to the result of the phylogenetic analysis. The affiliation of TbRV-1 with members of the family Rhabdoviridae was further validated by similar transcription termination motifs (GGAACUUUUUUU) to the Drosophila sigmavirus. The prevalence of TbRV-1 in all tissues suggested that the virus was constitutive of, and not specific to, any wasp tissue. To our knowledge, this is the first report on the complete genome sequence of a dimarhabdovirus in parasitoids. |
format | Online Article Text |
id | pubmed-6466307 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-64663072019-04-18 The First Complete Genome Sequence of a Novel Tetrastichus brontispae RNA Virus-1 (TbRV-1) Meng, E Tang, Baozhen Sanchez-Garcia, Francisco Javier Qiao, Ting Fu, Lang Wang, Yu Hou, You-Ming Wu, Jiang-Lin Chen, Zhi-Ming Viruses Article The complete sequence of a novel RNA virus isolated from Tetrastichus brontispae (TbRV-1) was determined to be 12,239 nucleotides in length with five non-overlapping, linearly arranged coding sequences (CDS), potentially encoding nucleoproteins, hypothetical proteins, matrix proteins, glycoproteins, and RNA-dependent RNA polymerases. Sequence analysis indicated that the RNA-dependent RNA polymerase of TbRV-1 shares a 65% nucleotide and 67% amino acid sequence identity with Hubei dimarhabdovirus 2, suggesting that TbRV-1 is a member of the dimarhabdovirus supergroup. This corresponded to the result of the phylogenetic analysis. The affiliation of TbRV-1 with members of the family Rhabdoviridae was further validated by similar transcription termination motifs (GGAACUUUUUUU) to the Drosophila sigmavirus. The prevalence of TbRV-1 in all tissues suggested that the virus was constitutive of, and not specific to, any wasp tissue. To our knowledge, this is the first report on the complete genome sequence of a dimarhabdovirus in parasitoids. MDPI 2019-03-13 /pmc/articles/PMC6466307/ /pubmed/30871248 http://dx.doi.org/10.3390/v11030257 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Meng, E Tang, Baozhen Sanchez-Garcia, Francisco Javier Qiao, Ting Fu, Lang Wang, Yu Hou, You-Ming Wu, Jiang-Lin Chen, Zhi-Ming The First Complete Genome Sequence of a Novel Tetrastichus brontispae RNA Virus-1 (TbRV-1) |
title | The First Complete Genome Sequence of a Novel Tetrastichus brontispae RNA Virus-1 (TbRV-1) |
title_full | The First Complete Genome Sequence of a Novel Tetrastichus brontispae RNA Virus-1 (TbRV-1) |
title_fullStr | The First Complete Genome Sequence of a Novel Tetrastichus brontispae RNA Virus-1 (TbRV-1) |
title_full_unstemmed | The First Complete Genome Sequence of a Novel Tetrastichus brontispae RNA Virus-1 (TbRV-1) |
title_short | The First Complete Genome Sequence of a Novel Tetrastichus brontispae RNA Virus-1 (TbRV-1) |
title_sort | first complete genome sequence of a novel tetrastichus brontispae rna virus-1 (tbrv-1) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6466307/ https://www.ncbi.nlm.nih.gov/pubmed/30871248 http://dx.doi.org/10.3390/v11030257 |
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