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DegNorm: normalization of generalized transcript degradation improves accuracy in RNA-seq analysis

RNA degradation affects RNA-seq quality when profiling transcriptional activities in cells. Here, we show that transcript degradation is both gene- and sample-specific and is a common and significant factor that may bias the results in RNA-seq analysis. Most existing global normalization approaches...

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Detalles Bibliográficos
Autores principales: Xiong, Bin, Yang, Yiben, Fineis, Frank R., Wang, Ji-Ping
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6466807/
https://www.ncbi.nlm.nih.gov/pubmed/30992037
http://dx.doi.org/10.1186/s13059-019-1682-7