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Microbial and metabolic succession on common building materials under high humidity conditions
Despite considerable efforts to characterize the microbial ecology of the built environment, the metabolic mechanisms underpinning microbial colonization and successional dynamics remain unclear, particularly at high moisture conditions. Here, we applied bacterial/viral particle counting, qPCR, ampl...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6467912/ https://www.ncbi.nlm.nih.gov/pubmed/30992445 http://dx.doi.org/10.1038/s41467-019-09764-z |
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author | Lax, Simon Cardona, Cesar Zhao, Dan Winton, Valerie J. Goodney, Gabriel Gao, Peng Gottel, Neil Hartmann, Erica M. Henry, Chris Thomas, Paul M. Kelley, Scott T. Stephens, Brent Gilbert, Jack A. |
author_facet | Lax, Simon Cardona, Cesar Zhao, Dan Winton, Valerie J. Goodney, Gabriel Gao, Peng Gottel, Neil Hartmann, Erica M. Henry, Chris Thomas, Paul M. Kelley, Scott T. Stephens, Brent Gilbert, Jack A. |
author_sort | Lax, Simon |
collection | PubMed |
description | Despite considerable efforts to characterize the microbial ecology of the built environment, the metabolic mechanisms underpinning microbial colonization and successional dynamics remain unclear, particularly at high moisture conditions. Here, we applied bacterial/viral particle counting, qPCR, amplicon sequencing of the genes encoding 16S and ITS rRNA, and metabolomics to longitudinally characterize the ecological dynamics of four common building materials maintained at high humidity. We varied the natural inoculum provided to each material and wet half of the samples to simulate a potable water leak. Wetted materials had higher growth rates and lower alpha diversity compared to non-wetted materials, and wetting described the majority of the variance in bacterial, fungal, and metabolite structure. Inoculation location was weakly associated with bacterial and fungal beta diversity. Material type influenced bacterial and viral particle abundance and bacterial and metabolic (but not fungal) diversity. Metabolites indicative of microbial activity were identified, and they too differed by material. |
format | Online Article Text |
id | pubmed-6467912 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-64679122019-04-18 Microbial and metabolic succession on common building materials under high humidity conditions Lax, Simon Cardona, Cesar Zhao, Dan Winton, Valerie J. Goodney, Gabriel Gao, Peng Gottel, Neil Hartmann, Erica M. Henry, Chris Thomas, Paul M. Kelley, Scott T. Stephens, Brent Gilbert, Jack A. Nat Commun Article Despite considerable efforts to characterize the microbial ecology of the built environment, the metabolic mechanisms underpinning microbial colonization and successional dynamics remain unclear, particularly at high moisture conditions. Here, we applied bacterial/viral particle counting, qPCR, amplicon sequencing of the genes encoding 16S and ITS rRNA, and metabolomics to longitudinally characterize the ecological dynamics of four common building materials maintained at high humidity. We varied the natural inoculum provided to each material and wet half of the samples to simulate a potable water leak. Wetted materials had higher growth rates and lower alpha diversity compared to non-wetted materials, and wetting described the majority of the variance in bacterial, fungal, and metabolite structure. Inoculation location was weakly associated with bacterial and fungal beta diversity. Material type influenced bacterial and viral particle abundance and bacterial and metabolic (but not fungal) diversity. Metabolites indicative of microbial activity were identified, and they too differed by material. Nature Publishing Group UK 2019-04-16 /pmc/articles/PMC6467912/ /pubmed/30992445 http://dx.doi.org/10.1038/s41467-019-09764-z Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Lax, Simon Cardona, Cesar Zhao, Dan Winton, Valerie J. Goodney, Gabriel Gao, Peng Gottel, Neil Hartmann, Erica M. Henry, Chris Thomas, Paul M. Kelley, Scott T. Stephens, Brent Gilbert, Jack A. Microbial and metabolic succession on common building materials under high humidity conditions |
title | Microbial and metabolic succession on common building materials under high humidity conditions |
title_full | Microbial and metabolic succession on common building materials under high humidity conditions |
title_fullStr | Microbial and metabolic succession on common building materials under high humidity conditions |
title_full_unstemmed | Microbial and metabolic succession on common building materials under high humidity conditions |
title_short | Microbial and metabolic succession on common building materials under high humidity conditions |
title_sort | microbial and metabolic succession on common building materials under high humidity conditions |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6467912/ https://www.ncbi.nlm.nih.gov/pubmed/30992445 http://dx.doi.org/10.1038/s41467-019-09764-z |
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