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Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU
Septic shock is a life-threatening condition in which timely treatment substantially reduces mortality. Reliable identification of patients with sepsis who are at elevated risk of developing septic shock therefore has the potential to save lives by opening an early window of intervention. We hypothe...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6467982/ https://www.ncbi.nlm.nih.gov/pubmed/30992534 http://dx.doi.org/10.1038/s41598-019-42637-5 |
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author | Liu, Ran Greenstein, Joseph L. Granite, Stephen J. Fackler, James C. Bembea, Melania M. Sarma, Sridevi V. Winslow, Raimond L. |
author_facet | Liu, Ran Greenstein, Joseph L. Granite, Stephen J. Fackler, James C. Bembea, Melania M. Sarma, Sridevi V. Winslow, Raimond L. |
author_sort | Liu, Ran |
collection | PubMed |
description | Septic shock is a life-threatening condition in which timely treatment substantially reduces mortality. Reliable identification of patients with sepsis who are at elevated risk of developing septic shock therefore has the potential to save lives by opening an early window of intervention. We hypothesize the existence of a novel clinical state of sepsis referred to as the “pre-shock” state, and that patients with sepsis who enter this state are highly likely to develop septic shock at some future time. We apply three different machine learning techniques to the electronic health record data of 15,930 patients in the MIMIC-III database to test this hypothesis. This novel paradigm yields improved performance in identifying patients with sepsis who will progress to septic shock, as defined by Sepsis- 3 criteria, with the best method achieving a 0.93 area under the receiver operating curve, 88% sensitivity, 84% specificity, and median early warning time of 7 hours. Additionally, we introduce the notion of patient-specific positive predictive value, assigning confidence to individual predictions, and achieving values as high as 91%. This study demonstrates that early prediction of impending septic shock, and thus early intervention, is possible many hours in advance. |
format | Online Article Text |
id | pubmed-6467982 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-64679822019-04-23 Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU Liu, Ran Greenstein, Joseph L. Granite, Stephen J. Fackler, James C. Bembea, Melania M. Sarma, Sridevi V. Winslow, Raimond L. Sci Rep Article Septic shock is a life-threatening condition in which timely treatment substantially reduces mortality. Reliable identification of patients with sepsis who are at elevated risk of developing septic shock therefore has the potential to save lives by opening an early window of intervention. We hypothesize the existence of a novel clinical state of sepsis referred to as the “pre-shock” state, and that patients with sepsis who enter this state are highly likely to develop septic shock at some future time. We apply three different machine learning techniques to the electronic health record data of 15,930 patients in the MIMIC-III database to test this hypothesis. This novel paradigm yields improved performance in identifying patients with sepsis who will progress to septic shock, as defined by Sepsis- 3 criteria, with the best method achieving a 0.93 area under the receiver operating curve, 88% sensitivity, 84% specificity, and median early warning time of 7 hours. Additionally, we introduce the notion of patient-specific positive predictive value, assigning confidence to individual predictions, and achieving values as high as 91%. This study demonstrates that early prediction of impending septic shock, and thus early intervention, is possible many hours in advance. Nature Publishing Group UK 2019-04-16 /pmc/articles/PMC6467982/ /pubmed/30992534 http://dx.doi.org/10.1038/s41598-019-42637-5 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Liu, Ran Greenstein, Joseph L. Granite, Stephen J. Fackler, James C. Bembea, Melania M. Sarma, Sridevi V. Winslow, Raimond L. Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU |
title | Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU |
title_full | Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU |
title_fullStr | Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU |
title_full_unstemmed | Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU |
title_short | Data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the ICU |
title_sort | data-driven discovery of a novel sepsis pre-shock state predicts impending septic shock in the icu |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6467982/ https://www.ncbi.nlm.nih.gov/pubmed/30992534 http://dx.doi.org/10.1038/s41598-019-42637-5 |
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