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High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary
In the present work, variability of both cytoplasmic and nuclear microsatellite traits was investigated with the aim of characterizing a set of rosemary germplasm resources (Salvia rosmarinus). Most of the materials were collected in Italy and France. High‐resolution melting curves were compared eac...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
John Wiley and Sons Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6468057/ https://www.ncbi.nlm.nih.gov/pubmed/31015962 http://dx.doi.org/10.1002/ece3.4998 |
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author | Nunziata, Angelina De Benedetti, Laura Marchioni, Ilaria Cervelli, Claudio |
author_facet | Nunziata, Angelina De Benedetti, Laura Marchioni, Ilaria Cervelli, Claudio |
author_sort | Nunziata, Angelina |
collection | PubMed |
description | In the present work, variability of both cytoplasmic and nuclear microsatellite traits was investigated with the aim of characterizing a set of rosemary germplasm resources (Salvia rosmarinus). Most of the materials were collected in Italy and France. High‐resolution melting curves were compared each other computing their Euclidean distances and estimating the differences within their principal component as a measure of genetic diversity. Mantel correlation results combined to linear discriminant analysis allowed examined populations to be divided in four principal groups corresponding to four geographic areas, with few interesting and discussed exceptions. As rosemary propagates by seeds coming from insect mediated pollination, steady wild populations can be expected to be in panmictic equilibrium. Gained results confirmed and extended precedent characterization of rosemary genotypes and are compatible with the distribution of other Mediterranean species, as well as with the presence of a glacial refugium in the north‐east area of Sardinia previously described. As the officinal use of this aromatic shrub is spreading, characterization and conservation of wild Mediterranean germplasm is gaining strategic importance. A core collection of 100 genotypes was pointed out as suitable for a cheaper biodiversity ex situ preservation as well as for subsequent metabolic and linkage disequilibrium analyses. |
format | Online Article Text |
id | pubmed-6468057 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | John Wiley and Sons Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-64680572019-04-23 High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary Nunziata, Angelina De Benedetti, Laura Marchioni, Ilaria Cervelli, Claudio Ecol Evol Original Research In the present work, variability of both cytoplasmic and nuclear microsatellite traits was investigated with the aim of characterizing a set of rosemary germplasm resources (Salvia rosmarinus). Most of the materials were collected in Italy and France. High‐resolution melting curves were compared each other computing their Euclidean distances and estimating the differences within their principal component as a measure of genetic diversity. Mantel correlation results combined to linear discriminant analysis allowed examined populations to be divided in four principal groups corresponding to four geographic areas, with few interesting and discussed exceptions. As rosemary propagates by seeds coming from insect mediated pollination, steady wild populations can be expected to be in panmictic equilibrium. Gained results confirmed and extended precedent characterization of rosemary genotypes and are compatible with the distribution of other Mediterranean species, as well as with the presence of a glacial refugium in the north‐east area of Sardinia previously described. As the officinal use of this aromatic shrub is spreading, characterization and conservation of wild Mediterranean germplasm is gaining strategic importance. A core collection of 100 genotypes was pointed out as suitable for a cheaper biodiversity ex situ preservation as well as for subsequent metabolic and linkage disequilibrium analyses. John Wiley and Sons Inc. 2019-03-18 /pmc/articles/PMC6468057/ /pubmed/31015962 http://dx.doi.org/10.1002/ece3.4998 Text en © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Original Research Nunziata, Angelina De Benedetti, Laura Marchioni, Ilaria Cervelli, Claudio High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary |
title | High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary |
title_full | High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary |
title_fullStr | High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary |
title_full_unstemmed | High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary |
title_short | High throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary |
title_sort | high throughput measure of diversity in cytoplasmic and nuclear traits for unravelling geographic distribution of rosemary |
topic | Original Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6468057/ https://www.ncbi.nlm.nih.gov/pubmed/31015962 http://dx.doi.org/10.1002/ece3.4998 |
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