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Breast Cancer Prognosis Using a Machine Learning Approach

Machine learning (ML) has been recently introduced to develop prognostic classification models that can be used to predict outcomes in individual cancer patients. Here, we report the significance of an ML-based decision support system (DSS), combined with random optimization (RO), to extract prognos...

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Autores principales: Ferroni, Patrizia, Zanzotto, Fabio M., Riondino, Silvia, Scarpato, Noemi, Guadagni, Fiorella, Roselli, Mario
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6468737/
https://www.ncbi.nlm.nih.gov/pubmed/30866535
http://dx.doi.org/10.3390/cancers11030328
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author Ferroni, Patrizia
Zanzotto, Fabio M.
Riondino, Silvia
Scarpato, Noemi
Guadagni, Fiorella
Roselli, Mario
author_facet Ferroni, Patrizia
Zanzotto, Fabio M.
Riondino, Silvia
Scarpato, Noemi
Guadagni, Fiorella
Roselli, Mario
author_sort Ferroni, Patrizia
collection PubMed
description Machine learning (ML) has been recently introduced to develop prognostic classification models that can be used to predict outcomes in individual cancer patients. Here, we report the significance of an ML-based decision support system (DSS), combined with random optimization (RO), to extract prognostic information from routinely collected demographic, clinical and biochemical data of breast cancer (BC) patients. A DSS model was developed in a training set (n = 318), whose performance analysis in the testing set (n = 136) resulted in a C-index for progression-free survival of 0.84, with an accuracy of 86%. Furthermore, the model was capable of stratifying the testing set into two groups of patients with low- or high-risk of progression with a hazard ratio (HR) of 10.9 (p < 0.0001). Validation in multicenter prospective studies and appropriate management of privacy issues in relation to digital electronic health records (EHR) data are presently needed. Nonetheless, we may conclude that the implementation of ML algorithms and RO models into EHR data might help to achieve prognostic information, and has the potential to revolutionize the practice of personalized medicine.
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spelling pubmed-64687372019-04-24 Breast Cancer Prognosis Using a Machine Learning Approach Ferroni, Patrizia Zanzotto, Fabio M. Riondino, Silvia Scarpato, Noemi Guadagni, Fiorella Roselli, Mario Cancers (Basel) Brief Report Machine learning (ML) has been recently introduced to develop prognostic classification models that can be used to predict outcomes in individual cancer patients. Here, we report the significance of an ML-based decision support system (DSS), combined with random optimization (RO), to extract prognostic information from routinely collected demographic, clinical and biochemical data of breast cancer (BC) patients. A DSS model was developed in a training set (n = 318), whose performance analysis in the testing set (n = 136) resulted in a C-index for progression-free survival of 0.84, with an accuracy of 86%. Furthermore, the model was capable of stratifying the testing set into two groups of patients with low- or high-risk of progression with a hazard ratio (HR) of 10.9 (p < 0.0001). Validation in multicenter prospective studies and appropriate management of privacy issues in relation to digital electronic health records (EHR) data are presently needed. Nonetheless, we may conclude that the implementation of ML algorithms and RO models into EHR data might help to achieve prognostic information, and has the potential to revolutionize the practice of personalized medicine. MDPI 2019-03-07 /pmc/articles/PMC6468737/ /pubmed/30866535 http://dx.doi.org/10.3390/cancers11030328 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Brief Report
Ferroni, Patrizia
Zanzotto, Fabio M.
Riondino, Silvia
Scarpato, Noemi
Guadagni, Fiorella
Roselli, Mario
Breast Cancer Prognosis Using a Machine Learning Approach
title Breast Cancer Prognosis Using a Machine Learning Approach
title_full Breast Cancer Prognosis Using a Machine Learning Approach
title_fullStr Breast Cancer Prognosis Using a Machine Learning Approach
title_full_unstemmed Breast Cancer Prognosis Using a Machine Learning Approach
title_short Breast Cancer Prognosis Using a Machine Learning Approach
title_sort breast cancer prognosis using a machine learning approach
topic Brief Report
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6468737/
https://www.ncbi.nlm.nih.gov/pubmed/30866535
http://dx.doi.org/10.3390/cancers11030328
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