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Breast Cancer Prognosis Using a Machine Learning Approach
Machine learning (ML) has been recently introduced to develop prognostic classification models that can be used to predict outcomes in individual cancer patients. Here, we report the significance of an ML-based decision support system (DSS), combined with random optimization (RO), to extract prognos...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6468737/ https://www.ncbi.nlm.nih.gov/pubmed/30866535 http://dx.doi.org/10.3390/cancers11030328 |
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author | Ferroni, Patrizia Zanzotto, Fabio M. Riondino, Silvia Scarpato, Noemi Guadagni, Fiorella Roselli, Mario |
author_facet | Ferroni, Patrizia Zanzotto, Fabio M. Riondino, Silvia Scarpato, Noemi Guadagni, Fiorella Roselli, Mario |
author_sort | Ferroni, Patrizia |
collection | PubMed |
description | Machine learning (ML) has been recently introduced to develop prognostic classification models that can be used to predict outcomes in individual cancer patients. Here, we report the significance of an ML-based decision support system (DSS), combined with random optimization (RO), to extract prognostic information from routinely collected demographic, clinical and biochemical data of breast cancer (BC) patients. A DSS model was developed in a training set (n = 318), whose performance analysis in the testing set (n = 136) resulted in a C-index for progression-free survival of 0.84, with an accuracy of 86%. Furthermore, the model was capable of stratifying the testing set into two groups of patients with low- or high-risk of progression with a hazard ratio (HR) of 10.9 (p < 0.0001). Validation in multicenter prospective studies and appropriate management of privacy issues in relation to digital electronic health records (EHR) data are presently needed. Nonetheless, we may conclude that the implementation of ML algorithms and RO models into EHR data might help to achieve prognostic information, and has the potential to revolutionize the practice of personalized medicine. |
format | Online Article Text |
id | pubmed-6468737 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-64687372019-04-24 Breast Cancer Prognosis Using a Machine Learning Approach Ferroni, Patrizia Zanzotto, Fabio M. Riondino, Silvia Scarpato, Noemi Guadagni, Fiorella Roselli, Mario Cancers (Basel) Brief Report Machine learning (ML) has been recently introduced to develop prognostic classification models that can be used to predict outcomes in individual cancer patients. Here, we report the significance of an ML-based decision support system (DSS), combined with random optimization (RO), to extract prognostic information from routinely collected demographic, clinical and biochemical data of breast cancer (BC) patients. A DSS model was developed in a training set (n = 318), whose performance analysis in the testing set (n = 136) resulted in a C-index for progression-free survival of 0.84, with an accuracy of 86%. Furthermore, the model was capable of stratifying the testing set into two groups of patients with low- or high-risk of progression with a hazard ratio (HR) of 10.9 (p < 0.0001). Validation in multicenter prospective studies and appropriate management of privacy issues in relation to digital electronic health records (EHR) data are presently needed. Nonetheless, we may conclude that the implementation of ML algorithms and RO models into EHR data might help to achieve prognostic information, and has the potential to revolutionize the practice of personalized medicine. MDPI 2019-03-07 /pmc/articles/PMC6468737/ /pubmed/30866535 http://dx.doi.org/10.3390/cancers11030328 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Brief Report Ferroni, Patrizia Zanzotto, Fabio M. Riondino, Silvia Scarpato, Noemi Guadagni, Fiorella Roselli, Mario Breast Cancer Prognosis Using a Machine Learning Approach |
title | Breast Cancer Prognosis Using a Machine Learning Approach |
title_full | Breast Cancer Prognosis Using a Machine Learning Approach |
title_fullStr | Breast Cancer Prognosis Using a Machine Learning Approach |
title_full_unstemmed | Breast Cancer Prognosis Using a Machine Learning Approach |
title_short | Breast Cancer Prognosis Using a Machine Learning Approach |
title_sort | breast cancer prognosis using a machine learning approach |
topic | Brief Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6468737/ https://www.ncbi.nlm.nih.gov/pubmed/30866535 http://dx.doi.org/10.3390/cancers11030328 |
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