Cargando…
CRISPR/Cas precision: do we need to worry about off-targeting in plants?
The CRISPR/Cas technology has recently become the tool of choice for targeted genome modification in plants and beyond. Although CRSIPR/Cas offers a rapid and facile way of introducing changes at genomic loci of interest, its application is associated with off-targeting, i.e. introduction of uninten...
Autores principales: | , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6469637/ https://www.ncbi.nlm.nih.gov/pubmed/30426198 http://dx.doi.org/10.1007/s00299-018-2355-9 |
_version_ | 1783411659625201664 |
---|---|
author | Hahn, Florian Nekrasov, Vladimir |
author_facet | Hahn, Florian Nekrasov, Vladimir |
author_sort | Hahn, Florian |
collection | PubMed |
description | The CRISPR/Cas technology has recently become the tool of choice for targeted genome modification in plants and beyond. Although CRSIPR/Cas offers a rapid and facile way of introducing changes at genomic loci of interest, its application is associated with off-targeting, i.e. introduction of unintended mutations at off-target sites within the genome, which has been reported frequently in the mammalian field. Here we summarise the current knowledge on the precision of CRISPR/Cas in plant systems and provide a summary of state-of the-art strategies for avoiding off-target mutations, as well as unintended on-target changes, in plants. These include using natural (e.g. Cas12a) or engineered (e.g. SpCas9-HF) CRISPR/Cas nucleases characterised by higher precision, as compared to the commonly used wild type SpCas9. In addition, we discuss the usage of CRISPR/Cas nucleases in the form of ribonucleoproteins (RNPs) as an option for reducing off-targeting in plants. Finally, we conclude that the most important factor for reducing CRISPR/Cas off-targeting remains careful selection of target sequences, for which we provide an overview of available online software tools and experimental guidance. |
format | Online Article Text |
id | pubmed-6469637 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-64696372019-05-03 CRISPR/Cas precision: do we need to worry about off-targeting in plants? Hahn, Florian Nekrasov, Vladimir Plant Cell Rep Opinion Paper The CRISPR/Cas technology has recently become the tool of choice for targeted genome modification in plants and beyond. Although CRSIPR/Cas offers a rapid and facile way of introducing changes at genomic loci of interest, its application is associated with off-targeting, i.e. introduction of unintended mutations at off-target sites within the genome, which has been reported frequently in the mammalian field. Here we summarise the current knowledge on the precision of CRISPR/Cas in plant systems and provide a summary of state-of the-art strategies for avoiding off-target mutations, as well as unintended on-target changes, in plants. These include using natural (e.g. Cas12a) or engineered (e.g. SpCas9-HF) CRISPR/Cas nucleases characterised by higher precision, as compared to the commonly used wild type SpCas9. In addition, we discuss the usage of CRISPR/Cas nucleases in the form of ribonucleoproteins (RNPs) as an option for reducing off-targeting in plants. Finally, we conclude that the most important factor for reducing CRISPR/Cas off-targeting remains careful selection of target sequences, for which we provide an overview of available online software tools and experimental guidance. Springer Berlin Heidelberg 2018-11-13 2019 /pmc/articles/PMC6469637/ /pubmed/30426198 http://dx.doi.org/10.1007/s00299-018-2355-9 Text en © The Author(s) 2018 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Opinion Paper Hahn, Florian Nekrasov, Vladimir CRISPR/Cas precision: do we need to worry about off-targeting in plants? |
title | CRISPR/Cas precision: do we need to worry about off-targeting in plants? |
title_full | CRISPR/Cas precision: do we need to worry about off-targeting in plants? |
title_fullStr | CRISPR/Cas precision: do we need to worry about off-targeting in plants? |
title_full_unstemmed | CRISPR/Cas precision: do we need to worry about off-targeting in plants? |
title_short | CRISPR/Cas precision: do we need to worry about off-targeting in plants? |
title_sort | crispr/cas precision: do we need to worry about off-targeting in plants? |
topic | Opinion Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6469637/ https://www.ncbi.nlm.nih.gov/pubmed/30426198 http://dx.doi.org/10.1007/s00299-018-2355-9 |
work_keys_str_mv | AT hahnflorian crisprcasprecisiondoweneedtoworryaboutofftargetinginplants AT nekrasovvladimir crisprcasprecisiondoweneedtoworryaboutofftargetinginplants |