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Group A rotavirus surveillance before vaccine introduction in Italy, September 2014 to August 2017

INTRODUCTION: Group A rotaviruses (RVA) are the leading cause of acute gastroenteritis (AGE) in young children, causing ca 250,000 deaths worldwide, mainly in low-income countries. Two proteins, VP7 (glycoprotein, G genotype) and VP4 (protease-sensitive protein, P genotype), are the basis for the bi...

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Autores principales: Ianiro, Giovanni, Micolano, Roberto, Di Bartolo, Ilaria, Scavia, Gaia, Monini, Marina
Formato: Online Artículo Texto
Lenguaje:English
Publicado: European Centre for Disease Prevention and Control (ECDC) 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6470368/
https://www.ncbi.nlm.nih.gov/pubmed/30994104
http://dx.doi.org/10.2807/1560-7917.ES.2019.24.15.1800418
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author Ianiro, Giovanni
Micolano, Roberto
Di Bartolo, Ilaria
Scavia, Gaia
Monini, Marina
author_facet Ianiro, Giovanni
Micolano, Roberto
Di Bartolo, Ilaria
Scavia, Gaia
Monini, Marina
author_sort Ianiro, Giovanni
collection PubMed
description INTRODUCTION: Group A rotaviruses (RVA) are the leading cause of acute gastroenteritis (AGE) in young children, causing ca 250,000 deaths worldwide, mainly in low-income countries. Two proteins, VP7 (glycoprotein, G genotype) and VP4 (protease-sensitive protein, P genotype), are the basis for the binary RVA nomenclature. Although 36 G types and 51 P types are presently known, most RVA infections in humans worldwide are related to five G/P combinations: G1P[8], G2P[4], G3P[8], G4P[8], G9P[8]. AIM: This study aimed to characterise the RVA strains circulating in Italy in the pre-vaccination era, to define the trends of circulation of genotypes in the Italian paediatric population. METHODS: Between September 2014 and August 2017, after routine screening in hospital by commercial antigen detection kit, 2,202 rotavirus-positive samples were collected in Italy from children hospitalised with AGE; the viruses were genotyped following standard European protocols. RESULTS: This 3-year study revealed an overall predominance of the G12P[8] genotype (544 of 2,202 cases; 24.70%), followed by G9P[8] (535/2,202; 24.30%), G1P[8] (459/2,202; 20.84%) and G4P[8] (371/2,202; 16.85%). G2P[4] and G3P[8] genotypes were detected at low rates (3.32% and 3.09%, respectively). Mixed infections accounted for 6.49% of cases (143/2,202), uncommon RVA strains for 0.41% of cases (9/2,202). CONCLUSIONS: The emergence of G12P[8] rotavirus in Italy, as in other countries, marks this genotype as the sixth most common human genotype. Continuous surveillance of RVA strains and monitoring of circulating genotypes are important for a better understanding of rotavirus evolution and genotype distribution, particularly regarding strains that may emerge from reassortment events.
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spelling pubmed-64703682019-05-01 Group A rotavirus surveillance before vaccine introduction in Italy, September 2014 to August 2017 Ianiro, Giovanni Micolano, Roberto Di Bartolo, Ilaria Scavia, Gaia Monini, Marina Euro Surveill Surveillance INTRODUCTION: Group A rotaviruses (RVA) are the leading cause of acute gastroenteritis (AGE) in young children, causing ca 250,000 deaths worldwide, mainly in low-income countries. Two proteins, VP7 (glycoprotein, G genotype) and VP4 (protease-sensitive protein, P genotype), are the basis for the binary RVA nomenclature. Although 36 G types and 51 P types are presently known, most RVA infections in humans worldwide are related to five G/P combinations: G1P[8], G2P[4], G3P[8], G4P[8], G9P[8]. AIM: This study aimed to characterise the RVA strains circulating in Italy in the pre-vaccination era, to define the trends of circulation of genotypes in the Italian paediatric population. METHODS: Between September 2014 and August 2017, after routine screening in hospital by commercial antigen detection kit, 2,202 rotavirus-positive samples were collected in Italy from children hospitalised with AGE; the viruses were genotyped following standard European protocols. RESULTS: This 3-year study revealed an overall predominance of the G12P[8] genotype (544 of 2,202 cases; 24.70%), followed by G9P[8] (535/2,202; 24.30%), G1P[8] (459/2,202; 20.84%) and G4P[8] (371/2,202; 16.85%). G2P[4] and G3P[8] genotypes were detected at low rates (3.32% and 3.09%, respectively). Mixed infections accounted for 6.49% of cases (143/2,202), uncommon RVA strains for 0.41% of cases (9/2,202). CONCLUSIONS: The emergence of G12P[8] rotavirus in Italy, as in other countries, marks this genotype as the sixth most common human genotype. Continuous surveillance of RVA strains and monitoring of circulating genotypes are important for a better understanding of rotavirus evolution and genotype distribution, particularly regarding strains that may emerge from reassortment events. European Centre for Disease Prevention and Control (ECDC) 2019-04-11 /pmc/articles/PMC6470368/ /pubmed/30994104 http://dx.doi.org/10.2807/1560-7917.ES.2019.24.15.1800418 Text en This article is copyright of the authors or their affiliated institutions, 2019. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC BY 4.0) Licence. You may share and adapt the material, but must give appropriate credit to the source, provide a link to the licence, and indicate if changes were made.
spellingShingle Surveillance
Ianiro, Giovanni
Micolano, Roberto
Di Bartolo, Ilaria
Scavia, Gaia
Monini, Marina
Group A rotavirus surveillance before vaccine introduction in Italy, September 2014 to August 2017
title Group A rotavirus surveillance before vaccine introduction in Italy, September 2014 to August 2017
title_full Group A rotavirus surveillance before vaccine introduction in Italy, September 2014 to August 2017
title_fullStr Group A rotavirus surveillance before vaccine introduction in Italy, September 2014 to August 2017
title_full_unstemmed Group A rotavirus surveillance before vaccine introduction in Italy, September 2014 to August 2017
title_short Group A rotavirus surveillance before vaccine introduction in Italy, September 2014 to August 2017
title_sort group a rotavirus surveillance before vaccine introduction in italy, september 2014 to august 2017
topic Surveillance
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6470368/
https://www.ncbi.nlm.nih.gov/pubmed/30994104
http://dx.doi.org/10.2807/1560-7917.ES.2019.24.15.1800418
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