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Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing

The aim of the present study was to examine the associations between 112 acute myeloid leukaemia (AML)-associated genes and the prognosis and clinical features of AML using bioinformatics analysis in 62 patients with AML. A total of 61 gene mutations were identified, and ≥1 mutations were detected i...

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Autores principales: Li, Ying, Lv, Xiao, Ge, Xueling, Yuan, Dai, Ding, Mei, Zhen, Changqing, Zhao, Wenbo, Liu, Xin, Wang, Xianghua, Xu, Hongzhi, Wang, Xin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6471684/
https://www.ncbi.nlm.nih.gov/pubmed/30942411
http://dx.doi.org/10.3892/mmr.2019.10081
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author Li, Ying
Lv, Xiao
Ge, Xueling
Yuan, Dai
Ding, Mei
Zhen, Changqing
Zhao, Wenbo
Liu, Xin
Wang, Xianghua
Xu, Hongzhi
Li, Ying
Wang, Xin
author_facet Li, Ying
Lv, Xiao
Ge, Xueling
Yuan, Dai
Ding, Mei
Zhen, Changqing
Zhao, Wenbo
Liu, Xin
Wang, Xianghua
Xu, Hongzhi
Li, Ying
Wang, Xin
author_sort Li, Ying
collection PubMed
description The aim of the present study was to examine the associations between 112 acute myeloid leukaemia (AML)-associated genes and the prognosis and clinical features of AML using bioinformatics analysis in 62 patients with AML. A total of 61 gene mutations were identified, and ≥1 mutations were detected in 96.77% of the patients. A total of 11 frequent mutations were identified, including nucleophosmin 1 (NPM1), Fms related tyrosine kinase 3 (FLT3), DNA methyltransferase 3α (DNMT3A) and Notch 2 (NOTCH2), with a mutation rate of ≥10%. The FLT3 mutation was significantly associated with the white blood cell count at the time of diagnosis, and DNMT3A was significantly associated with the French-American-British subtype and cytogenetics of patients with AML. The FLT3, NPM1 and DNMT3A mutations were significantly associated with a poor overall survival (OS) in patients with AML. In addition, the co-mutation of DNMT3A-CCAAT enhancer binding protein α (CEBPA) was observed to be significantly associated with a poor OS in patients with AML. Furthermore, the functional enrichment analysis revealed that the co-mutations of FLT3-NOTCH2, SETBP1-CREBBP and DNMT3A-CEBPA were significantly enriched in processes of ‘negative regulation of cell differentiation’ and ‘immune system development’, indicating that these mutations may serve crucial roles in the diagnosis and treatment of AML.
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spelling pubmed-64716842019-04-23 Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing Li, Ying Lv, Xiao Ge, Xueling Yuan, Dai Ding, Mei Zhen, Changqing Zhao, Wenbo Liu, Xin Wang, Xianghua Xu, Hongzhi Li, Ying Wang, Xin Mol Med Rep Articles The aim of the present study was to examine the associations between 112 acute myeloid leukaemia (AML)-associated genes and the prognosis and clinical features of AML using bioinformatics analysis in 62 patients with AML. A total of 61 gene mutations were identified, and ≥1 mutations were detected in 96.77% of the patients. A total of 11 frequent mutations were identified, including nucleophosmin 1 (NPM1), Fms related tyrosine kinase 3 (FLT3), DNA methyltransferase 3α (DNMT3A) and Notch 2 (NOTCH2), with a mutation rate of ≥10%. The FLT3 mutation was significantly associated with the white blood cell count at the time of diagnosis, and DNMT3A was significantly associated with the French-American-British subtype and cytogenetics of patients with AML. The FLT3, NPM1 and DNMT3A mutations were significantly associated with a poor overall survival (OS) in patients with AML. In addition, the co-mutation of DNMT3A-CCAAT enhancer binding protein α (CEBPA) was observed to be significantly associated with a poor OS in patients with AML. Furthermore, the functional enrichment analysis revealed that the co-mutations of FLT3-NOTCH2, SETBP1-CREBBP and DNMT3A-CEBPA were significantly enriched in processes of ‘negative regulation of cell differentiation’ and ‘immune system development’, indicating that these mutations may serve crucial roles in the diagnosis and treatment of AML. D.A. Spandidos 2019-05 2019-03-22 /pmc/articles/PMC6471684/ /pubmed/30942411 http://dx.doi.org/10.3892/mmr.2019.10081 Text en Copyright: © Li et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Li, Ying
Lv, Xiao
Ge, Xueling
Yuan, Dai
Ding, Mei
Zhen, Changqing
Zhao, Wenbo
Liu, Xin
Wang, Xianghua
Xu, Hongzhi
Li, Ying
Wang, Xin
Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing
title Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing
title_full Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing
title_fullStr Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing
title_full_unstemmed Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing
title_short Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing
title_sort mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6471684/
https://www.ncbi.nlm.nih.gov/pubmed/30942411
http://dx.doi.org/10.3892/mmr.2019.10081
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