Cargando…
Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing
The aim of the present study was to examine the associations between 112 acute myeloid leukaemia (AML)-associated genes and the prognosis and clinical features of AML using bioinformatics analysis in 62 patients with AML. A total of 61 gene mutations were identified, and ≥1 mutations were detected i...
Autores principales: | , , , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
D.A. Spandidos
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6471684/ https://www.ncbi.nlm.nih.gov/pubmed/30942411 http://dx.doi.org/10.3892/mmr.2019.10081 |
_version_ | 1783412080569745408 |
---|---|
author | Li, Ying Lv, Xiao Ge, Xueling Yuan, Dai Ding, Mei Zhen, Changqing Zhao, Wenbo Liu, Xin Wang, Xianghua Xu, Hongzhi Li, Ying Wang, Xin |
author_facet | Li, Ying Lv, Xiao Ge, Xueling Yuan, Dai Ding, Mei Zhen, Changqing Zhao, Wenbo Liu, Xin Wang, Xianghua Xu, Hongzhi Li, Ying Wang, Xin |
author_sort | Li, Ying |
collection | PubMed |
description | The aim of the present study was to examine the associations between 112 acute myeloid leukaemia (AML)-associated genes and the prognosis and clinical features of AML using bioinformatics analysis in 62 patients with AML. A total of 61 gene mutations were identified, and ≥1 mutations were detected in 96.77% of the patients. A total of 11 frequent mutations were identified, including nucleophosmin 1 (NPM1), Fms related tyrosine kinase 3 (FLT3), DNA methyltransferase 3α (DNMT3A) and Notch 2 (NOTCH2), with a mutation rate of ≥10%. The FLT3 mutation was significantly associated with the white blood cell count at the time of diagnosis, and DNMT3A was significantly associated with the French-American-British subtype and cytogenetics of patients with AML. The FLT3, NPM1 and DNMT3A mutations were significantly associated with a poor overall survival (OS) in patients with AML. In addition, the co-mutation of DNMT3A-CCAAT enhancer binding protein α (CEBPA) was observed to be significantly associated with a poor OS in patients with AML. Furthermore, the functional enrichment analysis revealed that the co-mutations of FLT3-NOTCH2, SETBP1-CREBBP and DNMT3A-CEBPA were significantly enriched in processes of ‘negative regulation of cell differentiation’ and ‘immune system development’, indicating that these mutations may serve crucial roles in the diagnosis and treatment of AML. |
format | Online Article Text |
id | pubmed-6471684 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | D.A. Spandidos |
record_format | MEDLINE/PubMed |
spelling | pubmed-64716842019-04-23 Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing Li, Ying Lv, Xiao Ge, Xueling Yuan, Dai Ding, Mei Zhen, Changqing Zhao, Wenbo Liu, Xin Wang, Xianghua Xu, Hongzhi Li, Ying Wang, Xin Mol Med Rep Articles The aim of the present study was to examine the associations between 112 acute myeloid leukaemia (AML)-associated genes and the prognosis and clinical features of AML using bioinformatics analysis in 62 patients with AML. A total of 61 gene mutations were identified, and ≥1 mutations were detected in 96.77% of the patients. A total of 11 frequent mutations were identified, including nucleophosmin 1 (NPM1), Fms related tyrosine kinase 3 (FLT3), DNA methyltransferase 3α (DNMT3A) and Notch 2 (NOTCH2), with a mutation rate of ≥10%. The FLT3 mutation was significantly associated with the white blood cell count at the time of diagnosis, and DNMT3A was significantly associated with the French-American-British subtype and cytogenetics of patients with AML. The FLT3, NPM1 and DNMT3A mutations were significantly associated with a poor overall survival (OS) in patients with AML. In addition, the co-mutation of DNMT3A-CCAAT enhancer binding protein α (CEBPA) was observed to be significantly associated with a poor OS in patients with AML. Furthermore, the functional enrichment analysis revealed that the co-mutations of FLT3-NOTCH2, SETBP1-CREBBP and DNMT3A-CEBPA were significantly enriched in processes of ‘negative regulation of cell differentiation’ and ‘immune system development’, indicating that these mutations may serve crucial roles in the diagnosis and treatment of AML. D.A. Spandidos 2019-05 2019-03-22 /pmc/articles/PMC6471684/ /pubmed/30942411 http://dx.doi.org/10.3892/mmr.2019.10081 Text en Copyright: © Li et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made. |
spellingShingle | Articles Li, Ying Lv, Xiao Ge, Xueling Yuan, Dai Ding, Mei Zhen, Changqing Zhao, Wenbo Liu, Xin Wang, Xianghua Xu, Hongzhi Li, Ying Wang, Xin Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing |
title | Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing |
title_full | Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing |
title_fullStr | Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing |
title_full_unstemmed | Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing |
title_short | Mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing |
title_sort | mutational spectrum and associations with clinical features in patients with acute myeloid leukaemia based on next-generation sequencing |
topic | Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6471684/ https://www.ncbi.nlm.nih.gov/pubmed/30942411 http://dx.doi.org/10.3892/mmr.2019.10081 |
work_keys_str_mv | AT liying mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT lvxiao mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT gexueling mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT yuandai mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT dingmei mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT zhenchangqing mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT zhaowenbo mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT liuxin mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT wangxianghua mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT xuhongzhi mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT liying mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing AT wangxin mutationalspectrumandassociationswithclinicalfeaturesinpatientswithacutemyeloidleukaemiabasedonnextgenerationsequencing |