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Multi-trait multi-environment models in the genetic selection of segregating soybean progeny
At present, single-trait best linear unbiased prediction (BLUP) is the standard method for genetic selection in soybean. However, when genetic selection is performed based on two or more genetically correlated traits and these are analyzed individually, selection bias may arise. Under these conditio...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6472761/ https://www.ncbi.nlm.nih.gov/pubmed/30998705 http://dx.doi.org/10.1371/journal.pone.0215315 |
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author | Volpato, Leonardo Alves, Rodrigo Silva Teodoro, Paulo Eduardo Vilela de Resende, Marcos Deon Nascimento, Moysés Nascimento, Ana Carolina Campana Ludke, Willian Hytalo Lopes da Silva, Felipe Borém, Aluízio |
author_facet | Volpato, Leonardo Alves, Rodrigo Silva Teodoro, Paulo Eduardo Vilela de Resende, Marcos Deon Nascimento, Moysés Nascimento, Ana Carolina Campana Ludke, Willian Hytalo Lopes da Silva, Felipe Borém, Aluízio |
author_sort | Volpato, Leonardo |
collection | PubMed |
description | At present, single-trait best linear unbiased prediction (BLUP) is the standard method for genetic selection in soybean. However, when genetic selection is performed based on two or more genetically correlated traits and these are analyzed individually, selection bias may arise. Under these conditions, considering the correlation structure between the evaluated traits may provide more-accurate genetic estimates for the evaluated parameters, even under environmental influences. The present study was thus developed to examine the efficiency and applicability of multi-trait multi-environment (MTME) models by the residual maximum likelihood (REML/BLUP) and Bayesian approaches in the genetic selection of segregating soybean progeny. The study involved data pertaining to 203 soybean F(2:4) progeny assessed in two environments for the following traits: number of days to maturity (DM), 100-seed weight (SW), and average seed yield per plot (SY). Variance components and genetic and non-genetic parameters were estimated via the REML/BLUP and Bayesian methods. The variance components estimated and the breeding values and genetic gains predicted with selection through the Bayesian procedure were similar to those obtained by REML/BLUP. The frequentist and Bayesian MTME models provided higher estimates of broad-sense heritability per plot (or heritability of total effects of progeny; [Image: see text] ) and mean accuracy of progeny than their respective single-trait versions. Bayesian analysis provided the credibility intervals for the estimates of [Image: see text] . Therefore, MTME led to greater predicted gains from selection. On this basis, this procedure can be efficiently applied in the genetic selection of segregating soybean progeny. |
format | Online Article Text |
id | pubmed-6472761 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-64727612019-05-03 Multi-trait multi-environment models in the genetic selection of segregating soybean progeny Volpato, Leonardo Alves, Rodrigo Silva Teodoro, Paulo Eduardo Vilela de Resende, Marcos Deon Nascimento, Moysés Nascimento, Ana Carolina Campana Ludke, Willian Hytalo Lopes da Silva, Felipe Borém, Aluízio PLoS One Research Article At present, single-trait best linear unbiased prediction (BLUP) is the standard method for genetic selection in soybean. However, when genetic selection is performed based on two or more genetically correlated traits and these are analyzed individually, selection bias may arise. Under these conditions, considering the correlation structure between the evaluated traits may provide more-accurate genetic estimates for the evaluated parameters, even under environmental influences. The present study was thus developed to examine the efficiency and applicability of multi-trait multi-environment (MTME) models by the residual maximum likelihood (REML/BLUP) and Bayesian approaches in the genetic selection of segregating soybean progeny. The study involved data pertaining to 203 soybean F(2:4) progeny assessed in two environments for the following traits: number of days to maturity (DM), 100-seed weight (SW), and average seed yield per plot (SY). Variance components and genetic and non-genetic parameters were estimated via the REML/BLUP and Bayesian methods. The variance components estimated and the breeding values and genetic gains predicted with selection through the Bayesian procedure were similar to those obtained by REML/BLUP. The frequentist and Bayesian MTME models provided higher estimates of broad-sense heritability per plot (or heritability of total effects of progeny; [Image: see text] ) and mean accuracy of progeny than their respective single-trait versions. Bayesian analysis provided the credibility intervals for the estimates of [Image: see text] . Therefore, MTME led to greater predicted gains from selection. On this basis, this procedure can be efficiently applied in the genetic selection of segregating soybean progeny. Public Library of Science 2019-04-18 /pmc/articles/PMC6472761/ /pubmed/30998705 http://dx.doi.org/10.1371/journal.pone.0215315 Text en © 2019 Volpato et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Volpato, Leonardo Alves, Rodrigo Silva Teodoro, Paulo Eduardo Vilela de Resende, Marcos Deon Nascimento, Moysés Nascimento, Ana Carolina Campana Ludke, Willian Hytalo Lopes da Silva, Felipe Borém, Aluízio Multi-trait multi-environment models in the genetic selection of segregating soybean progeny |
title | Multi-trait multi-environment models in the genetic selection of segregating soybean progeny |
title_full | Multi-trait multi-environment models in the genetic selection of segregating soybean progeny |
title_fullStr | Multi-trait multi-environment models in the genetic selection of segregating soybean progeny |
title_full_unstemmed | Multi-trait multi-environment models in the genetic selection of segregating soybean progeny |
title_short | Multi-trait multi-environment models in the genetic selection of segregating soybean progeny |
title_sort | multi-trait multi-environment models in the genetic selection of segregating soybean progeny |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6472761/ https://www.ncbi.nlm.nih.gov/pubmed/30998705 http://dx.doi.org/10.1371/journal.pone.0215315 |
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