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Accounting for Healthcare-Seeking Behaviours and Testing Practices in Real-Time Influenza Forecasts

For diseases such as influenza, where the majority of infected persons experience mild (if any) symptoms, surveillance systems are sensitive to changes in healthcare-seeking and clinical decision-making behaviours. This presents a challenge when trying to interpret surveillance data in near-real-tim...

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Autores principales: Moss, Robert, Zarebski, Alexander E., Carlson, Sandra J., McCaw, James M.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6473244/
https://www.ncbi.nlm.nih.gov/pubmed/30641917
http://dx.doi.org/10.3390/tropicalmed4010012
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author Moss, Robert
Zarebski, Alexander E.
Carlson, Sandra J.
McCaw, James M.
author_facet Moss, Robert
Zarebski, Alexander E.
Carlson, Sandra J.
McCaw, James M.
author_sort Moss, Robert
collection PubMed
description For diseases such as influenza, where the majority of infected persons experience mild (if any) symptoms, surveillance systems are sensitive to changes in healthcare-seeking and clinical decision-making behaviours. This presents a challenge when trying to interpret surveillance data in near-real-time (e.g., to provide public health decision-support). Australia experienced a particularly large and severe influenza season in 2017, perhaps in part due to: (a) mild cases being more likely to seek healthcare; and (b) clinicians being more likely to collect specimens for reverse transcription polymerase chain reaction (RT-PCR) influenza tests. In this study, we used weekly Flutracking surveillance data to estimate the probability that a person with influenza-like illness (ILI) would seek healthcare and have a specimen collected. We then used this estimated probability to calibrate near-real-time seasonal influenza forecasts at each week of the 2017 season, to see whether predictive skill could be improved. While the number of self-reported influenza tests in the weekly surveys are typically very low, we were able to detect a substantial change in healthcare seeking behaviour and clinician testing behaviour prior to the high epidemic peak. Adjusting for these changes in behaviour in the forecasting framework improved predictive skill. Our analysis demonstrates a unique value of community-level surveillance systems, such as Flutracking, when interpreting traditional surveillance data. These methods are also applicable beyond the Australian context, as similar community-level surveillance systems operate in other countries.
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spelling pubmed-64732442019-04-29 Accounting for Healthcare-Seeking Behaviours and Testing Practices in Real-Time Influenza Forecasts Moss, Robert Zarebski, Alexander E. Carlson, Sandra J. McCaw, James M. Trop Med Infect Dis Article For diseases such as influenza, where the majority of infected persons experience mild (if any) symptoms, surveillance systems are sensitive to changes in healthcare-seeking and clinical decision-making behaviours. This presents a challenge when trying to interpret surveillance data in near-real-time (e.g., to provide public health decision-support). Australia experienced a particularly large and severe influenza season in 2017, perhaps in part due to: (a) mild cases being more likely to seek healthcare; and (b) clinicians being more likely to collect specimens for reverse transcription polymerase chain reaction (RT-PCR) influenza tests. In this study, we used weekly Flutracking surveillance data to estimate the probability that a person with influenza-like illness (ILI) would seek healthcare and have a specimen collected. We then used this estimated probability to calibrate near-real-time seasonal influenza forecasts at each week of the 2017 season, to see whether predictive skill could be improved. While the number of self-reported influenza tests in the weekly surveys are typically very low, we were able to detect a substantial change in healthcare seeking behaviour and clinician testing behaviour prior to the high epidemic peak. Adjusting for these changes in behaviour in the forecasting framework improved predictive skill. Our analysis demonstrates a unique value of community-level surveillance systems, such as Flutracking, when interpreting traditional surveillance data. These methods are also applicable beyond the Australian context, as similar community-level surveillance systems operate in other countries. MDPI 2019-01-11 /pmc/articles/PMC6473244/ /pubmed/30641917 http://dx.doi.org/10.3390/tropicalmed4010012 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Moss, Robert
Zarebski, Alexander E.
Carlson, Sandra J.
McCaw, James M.
Accounting for Healthcare-Seeking Behaviours and Testing Practices in Real-Time Influenza Forecasts
title Accounting for Healthcare-Seeking Behaviours and Testing Practices in Real-Time Influenza Forecasts
title_full Accounting for Healthcare-Seeking Behaviours and Testing Practices in Real-Time Influenza Forecasts
title_fullStr Accounting for Healthcare-Seeking Behaviours and Testing Practices in Real-Time Influenza Forecasts
title_full_unstemmed Accounting for Healthcare-Seeking Behaviours and Testing Practices in Real-Time Influenza Forecasts
title_short Accounting for Healthcare-Seeking Behaviours and Testing Practices in Real-Time Influenza Forecasts
title_sort accounting for healthcare-seeking behaviours and testing practices in real-time influenza forecasts
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6473244/
https://www.ncbi.nlm.nih.gov/pubmed/30641917
http://dx.doi.org/10.3390/tropicalmed4010012
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