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Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae

Repetitive satellite DNA (satDNA) sequences are abundant in eukaryote genomes, with a structural and functional role in centromeric function. We analyzed the nucleotide sequence and chromosomal location of the five known cattle (Bos taurus) satDNA families in seven species from the tribe Tragelaphin...

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Autores principales: Escudeiro, Ana, Adega, Filomena, Robinson, Terence J, Heslop-Harrison, John S, Chaves, Raquel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6475130/
https://www.ncbi.nlm.nih.gov/pubmed/30888421
http://dx.doi.org/10.1093/gbe/evz061
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author Escudeiro, Ana
Adega, Filomena
Robinson, Terence J
Heslop-Harrison, John S
Chaves, Raquel
author_facet Escudeiro, Ana
Adega, Filomena
Robinson, Terence J
Heslop-Harrison, John S
Chaves, Raquel
author_sort Escudeiro, Ana
collection PubMed
description Repetitive satellite DNA (satDNA) sequences are abundant in eukaryote genomes, with a structural and functional role in centromeric function. We analyzed the nucleotide sequence and chromosomal location of the five known cattle (Bos taurus) satDNA families in seven species from the tribe Tragelaphini (Bovinae subfamily). One of the families (SAT1.723) was present at the chromosomes’ centromeres of the Tragelaphini species, as well in two more distantly related bovid species, Ovis aries and Capra hircus. Analysis of the interaction of SAT1.723 with centromeric proteins revealed that this satDNA sequence is involved in the centromeric activity in all the species analyzed and that it is preserved for at least 15–20 Myr across Bovidae species. The satDNA sequence similarity among the analyzed species reflected different stages of homogeneity/heterogeneity, revealing the evolutionary history of each satDNA family. The SAT1.723 monomer-flanking regions showed the presence of transposable elements, explaining the extensive shuffling of this satDNA between different genomic regions.
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spelling pubmed-64751302019-04-24 Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae Escudeiro, Ana Adega, Filomena Robinson, Terence J Heslop-Harrison, John S Chaves, Raquel Genome Biol Evol Research Article Repetitive satellite DNA (satDNA) sequences are abundant in eukaryote genomes, with a structural and functional role in centromeric function. We analyzed the nucleotide sequence and chromosomal location of the five known cattle (Bos taurus) satDNA families in seven species from the tribe Tragelaphini (Bovinae subfamily). One of the families (SAT1.723) was present at the chromosomes’ centromeres of the Tragelaphini species, as well in two more distantly related bovid species, Ovis aries and Capra hircus. Analysis of the interaction of SAT1.723 with centromeric proteins revealed that this satDNA sequence is involved in the centromeric activity in all the species analyzed and that it is preserved for at least 15–20 Myr across Bovidae species. The satDNA sequence similarity among the analyzed species reflected different stages of homogeneity/heterogeneity, revealing the evolutionary history of each satDNA family. The SAT1.723 monomer-flanking regions showed the presence of transposable elements, explaining the extensive shuffling of this satDNA between different genomic regions. Oxford University Press 2019-03-19 /pmc/articles/PMC6475130/ /pubmed/30888421 http://dx.doi.org/10.1093/gbe/evz061 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com
spellingShingle Research Article
Escudeiro, Ana
Adega, Filomena
Robinson, Terence J
Heslop-Harrison, John S
Chaves, Raquel
Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae
title Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae
title_full Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae
title_fullStr Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae
title_full_unstemmed Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae
title_short Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae
title_sort conservation, divergence, and functions of centromeric satellite dna families in the bovidae
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6475130/
https://www.ncbi.nlm.nih.gov/pubmed/30888421
http://dx.doi.org/10.1093/gbe/evz061
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