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Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae
Repetitive satellite DNA (satDNA) sequences are abundant in eukaryote genomes, with a structural and functional role in centromeric function. We analyzed the nucleotide sequence and chromosomal location of the five known cattle (Bos taurus) satDNA families in seven species from the tribe Tragelaphin...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Oxford University Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6475130/ https://www.ncbi.nlm.nih.gov/pubmed/30888421 http://dx.doi.org/10.1093/gbe/evz061 |
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author | Escudeiro, Ana Adega, Filomena Robinson, Terence J Heslop-Harrison, John S Chaves, Raquel |
author_facet | Escudeiro, Ana Adega, Filomena Robinson, Terence J Heslop-Harrison, John S Chaves, Raquel |
author_sort | Escudeiro, Ana |
collection | PubMed |
description | Repetitive satellite DNA (satDNA) sequences are abundant in eukaryote genomes, with a structural and functional role in centromeric function. We analyzed the nucleotide sequence and chromosomal location of the five known cattle (Bos taurus) satDNA families in seven species from the tribe Tragelaphini (Bovinae subfamily). One of the families (SAT1.723) was present at the chromosomes’ centromeres of the Tragelaphini species, as well in two more distantly related bovid species, Ovis aries and Capra hircus. Analysis of the interaction of SAT1.723 with centromeric proteins revealed that this satDNA sequence is involved in the centromeric activity in all the species analyzed and that it is preserved for at least 15–20 Myr across Bovidae species. The satDNA sequence similarity among the analyzed species reflected different stages of homogeneity/heterogeneity, revealing the evolutionary history of each satDNA family. The SAT1.723 monomer-flanking regions showed the presence of transposable elements, explaining the extensive shuffling of this satDNA between different genomic regions. |
format | Online Article Text |
id | pubmed-6475130 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-64751302019-04-24 Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae Escudeiro, Ana Adega, Filomena Robinson, Terence J Heslop-Harrison, John S Chaves, Raquel Genome Biol Evol Research Article Repetitive satellite DNA (satDNA) sequences are abundant in eukaryote genomes, with a structural and functional role in centromeric function. We analyzed the nucleotide sequence and chromosomal location of the five known cattle (Bos taurus) satDNA families in seven species from the tribe Tragelaphini (Bovinae subfamily). One of the families (SAT1.723) was present at the chromosomes’ centromeres of the Tragelaphini species, as well in two more distantly related bovid species, Ovis aries and Capra hircus. Analysis of the interaction of SAT1.723 with centromeric proteins revealed that this satDNA sequence is involved in the centromeric activity in all the species analyzed and that it is preserved for at least 15–20 Myr across Bovidae species. The satDNA sequence similarity among the analyzed species reflected different stages of homogeneity/heterogeneity, revealing the evolutionary history of each satDNA family. The SAT1.723 monomer-flanking regions showed the presence of transposable elements, explaining the extensive shuffling of this satDNA between different genomic regions. Oxford University Press 2019-03-19 /pmc/articles/PMC6475130/ /pubmed/30888421 http://dx.doi.org/10.1093/gbe/evz061 Text en © The Author(s) 2019. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. http://creativecommons.org/licenses/by-nc/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Research Article Escudeiro, Ana Adega, Filomena Robinson, Terence J Heslop-Harrison, John S Chaves, Raquel Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae |
title | Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae |
title_full | Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae |
title_fullStr | Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae |
title_full_unstemmed | Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae |
title_short | Conservation, Divergence, and Functions of Centromeric Satellite DNA Families in the Bovidae |
title_sort | conservation, divergence, and functions of centromeric satellite dna families in the bovidae |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6475130/ https://www.ncbi.nlm.nih.gov/pubmed/30888421 http://dx.doi.org/10.1093/gbe/evz061 |
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