Cargando…
OTUX: V-region specific OTU database for improved 16S rRNA OTU picking and efficient cross-study taxonomic comparison of microbiomes
Many microbiome studies employ reference-based operational taxonomic unit (OTU)-picking methods, which in general, rely on databases cataloguing reference OTUs identified through clustering full-length 16S rRNA genes. Given that the rate of accumulation of mutations are not uniform throughout the le...
Autores principales: | Yadav, Deepak, Dutta, Anirban, Mande, Sharmila S |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6476724/ https://www.ncbi.nlm.nih.gov/pubmed/30624596 http://dx.doi.org/10.1093/dnares/dsy045 |
Ejemplares similares
-
M-pick, a modularity-based method for OTU picking of 16S rRNA sequences
por: Wang, Xiaoyu, et al.
Publicado: (2013) -
Improved OTU-picking using long-read 16S rRNA gene amplicon sequencing and generic hierarchical clustering
por: Franzén, Oscar, et al.
Publicado: (2015) -
Erratum to: Improved OTU-picking using long-read 16S rRNA gene amplicon sequencing and generic hierarchical clustering
por: Franzén, Oscar, et al.
Publicado: (2015) -
dbOTU3: A new implementation of distribution-based OTU calling
por: Olesen, Scott W., et al.
Publicado: (2017) -
Clustering 16S rRNA for OTU prediction: a method of unsupervised Bayesian clustering
por: Hao, Xiaolin, et al.
Publicado: (2011)