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Accounting for kin sampling reveals genetic connectivity in Tasmanian and New Zealand school sharks, Galeorhinus galeus

Fishing represents a major problem for conservation of chondrichthyans, with a quarter of all species being overexploited. School sharks, Galeorhinus galeus, are targeted by commercial fisheries in Australia and New Zealand. The Australian stock has been depleted to below 20% of its virgin biomass,...

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Autores principales: Devloo‐Delva, Floriaan, Maes, Gregory E., Hernández, Sebastián I., Mcallister, Jaime D., Gunasekera, Rasanthi M., Grewe, Peter M., Thomson, Robin B., Feutry, Pierre
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6476751/
https://www.ncbi.nlm.nih.gov/pubmed/31031920
http://dx.doi.org/10.1002/ece3.5012
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author Devloo‐Delva, Floriaan
Maes, Gregory E.
Hernández, Sebastián I.
Mcallister, Jaime D.
Gunasekera, Rasanthi M.
Grewe, Peter M.
Thomson, Robin B.
Feutry, Pierre
author_facet Devloo‐Delva, Floriaan
Maes, Gregory E.
Hernández, Sebastián I.
Mcallister, Jaime D.
Gunasekera, Rasanthi M.
Grewe, Peter M.
Thomson, Robin B.
Feutry, Pierre
author_sort Devloo‐Delva, Floriaan
collection PubMed
description Fishing represents a major problem for conservation of chondrichthyans, with a quarter of all species being overexploited. School sharks, Galeorhinus galeus, are targeted by commercial fisheries in Australia and New Zealand. The Australian stock has been depleted to below 20% of its virgin biomass, and the species is recorded as Conservation Dependent within Australia. Individuals are known to move between both countries, but it is disputed whether the stocks are reproductively linked. Accurate and unbiased determination of stock and population connectivity is crucial to inform effective management. In this study, we assess the genetic composition and population connectivity between Australian and New Zealand school sharks using genome‐wide SNPs, while accounting for non‐random kin sampling. Between 2009 and 2013, 88 neonate and juvenile individuals from Tasmanian and New Zealand nurseries were collected and genotyped. Neutral loci were analyzed to detect fine‐scale signals of reproductive connectivity. Seven full‐sibling groups were identified and removed for unbiased analysis. Based on 6,587 neutral SNPs, pairwise genetic differentiation from Tasmanian and New Zealand neonates was non‐significant (F (ST) = 0.0003, CI(95) = [−0.0002, 0.0009], p = 0.1163; D (est) = 0.0006 ± 0.0002). This pattern was supported by clustering results. In conclusion, we show a significant effect of non‐random sampling of kin and identify fine‐scale reproductive connectivity between Australian and New Zealand school sharks. OPEN RESEARCH BADGES: [Image: see text] This article has earned an Open Data Badge for making publicly available the digitally‐shareable data necessary to reproduce the reported results. The data is available at https://doi.org/10.5061/dryad.pd8612j.
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spelling pubmed-64767512019-04-26 Accounting for kin sampling reveals genetic connectivity in Tasmanian and New Zealand school sharks, Galeorhinus galeus Devloo‐Delva, Floriaan Maes, Gregory E. Hernández, Sebastián I. Mcallister, Jaime D. Gunasekera, Rasanthi M. Grewe, Peter M. Thomson, Robin B. Feutry, Pierre Ecol Evol Original Research Fishing represents a major problem for conservation of chondrichthyans, with a quarter of all species being overexploited. School sharks, Galeorhinus galeus, are targeted by commercial fisheries in Australia and New Zealand. The Australian stock has been depleted to below 20% of its virgin biomass, and the species is recorded as Conservation Dependent within Australia. Individuals are known to move between both countries, but it is disputed whether the stocks are reproductively linked. Accurate and unbiased determination of stock and population connectivity is crucial to inform effective management. In this study, we assess the genetic composition and population connectivity between Australian and New Zealand school sharks using genome‐wide SNPs, while accounting for non‐random kin sampling. Between 2009 and 2013, 88 neonate and juvenile individuals from Tasmanian and New Zealand nurseries were collected and genotyped. Neutral loci were analyzed to detect fine‐scale signals of reproductive connectivity. Seven full‐sibling groups were identified and removed for unbiased analysis. Based on 6,587 neutral SNPs, pairwise genetic differentiation from Tasmanian and New Zealand neonates was non‐significant (F (ST) = 0.0003, CI(95) = [−0.0002, 0.0009], p = 0.1163; D (est) = 0.0006 ± 0.0002). This pattern was supported by clustering results. In conclusion, we show a significant effect of non‐random sampling of kin and identify fine‐scale reproductive connectivity between Australian and New Zealand school sharks. OPEN RESEARCH BADGES: [Image: see text] This article has earned an Open Data Badge for making publicly available the digitally‐shareable data necessary to reproduce the reported results. The data is available at https://doi.org/10.5061/dryad.pd8612j. John Wiley and Sons Inc. 2019-04-01 /pmc/articles/PMC6476751/ /pubmed/31031920 http://dx.doi.org/10.1002/ece3.5012 Text en © 2019 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Devloo‐Delva, Floriaan
Maes, Gregory E.
Hernández, Sebastián I.
Mcallister, Jaime D.
Gunasekera, Rasanthi M.
Grewe, Peter M.
Thomson, Robin B.
Feutry, Pierre
Accounting for kin sampling reveals genetic connectivity in Tasmanian and New Zealand school sharks, Galeorhinus galeus
title Accounting for kin sampling reveals genetic connectivity in Tasmanian and New Zealand school sharks, Galeorhinus galeus
title_full Accounting for kin sampling reveals genetic connectivity in Tasmanian and New Zealand school sharks, Galeorhinus galeus
title_fullStr Accounting for kin sampling reveals genetic connectivity in Tasmanian and New Zealand school sharks, Galeorhinus galeus
title_full_unstemmed Accounting for kin sampling reveals genetic connectivity in Tasmanian and New Zealand school sharks, Galeorhinus galeus
title_short Accounting for kin sampling reveals genetic connectivity in Tasmanian and New Zealand school sharks, Galeorhinus galeus
title_sort accounting for kin sampling reveals genetic connectivity in tasmanian and new zealand school sharks, galeorhinus galeus
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6476751/
https://www.ncbi.nlm.nih.gov/pubmed/31031920
http://dx.doi.org/10.1002/ece3.5012
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