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Prognostic Role of TMED3 in Clear Cell Renal Cell Carcinoma: A Retrospective Multi-Cohort Analysis
Transmembrane p24 trafficking protein 3 (TMED3) is a metastatic suppressor in colon cancer and hepatocellular carcinoma. However, its function in the progression of clear cell renal cell carcinoma (ccRCC) is unknown. Here, we report that TMED3 could be a new prognostic marker for ccRCC. Patient data...
Autores principales: | , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6478656/ https://www.ncbi.nlm.nih.gov/pubmed/31057605 http://dx.doi.org/10.3389/fgene.2019.00355 |
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author | Ha, Mihyang Moon, Hwan Choi, Dongwook Kang, Wonmo Kim, Ji-Hong Lee, Keon Jin Park, Dongsu Kang, Chi-Dug Oh, Sae-Ock Han, Myoung-Eun Kim, Yun Hak Lee, Dongjun |
author_facet | Ha, Mihyang Moon, Hwan Choi, Dongwook Kang, Wonmo Kim, Ji-Hong Lee, Keon Jin Park, Dongsu Kang, Chi-Dug Oh, Sae-Ock Han, Myoung-Eun Kim, Yun Hak Lee, Dongjun |
author_sort | Ha, Mihyang |
collection | PubMed |
description | Transmembrane p24 trafficking protein 3 (TMED3) is a metastatic suppressor in colon cancer and hepatocellular carcinoma. However, its function in the progression of clear cell renal cell carcinoma (ccRCC) is unknown. Here, we report that TMED3 could be a new prognostic marker for ccRCC. Patient data were extracted from cohorts in the Cancer Genome Atlas (TCGA) and the International Cancer Genome Consortium (ICGC). Differential expression of TMED3 was observed between the low stage (Stage I and II) and high stage (Stage III and IV) patients in the TCGA and ICGC cohorts and between the low grade (Grade I and II) and high grade (Grade III and IV) patients in the TCGA cohort. Further, we evaluated TMED3 expression as a prognostic gene using Kaplan-Meier survival analysis, multivariate analysis, the time-dependent area under the curve (AUC) of Uno’s C-index, and the AUC of the receiver operating characteristics at 5 years. The Kaplan-Meier analysis revealed that TMED3 overexpression was associated with poor prognosis for ccRCC patients. Analysis of the C-indices and area under the receiver operating characteristic curve further supported this. Multivariate analysis confirmed the prognostic significance of TMED3 expression levels (P = 0.005 and 0.006 for TCGA and ICGC, respectively). Taken together, these findings demonstrate that TMED3 is a potential prognostic factor for ccRCC. |
format | Online Article Text |
id | pubmed-6478656 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-64786562019-05-03 Prognostic Role of TMED3 in Clear Cell Renal Cell Carcinoma: A Retrospective Multi-Cohort Analysis Ha, Mihyang Moon, Hwan Choi, Dongwook Kang, Wonmo Kim, Ji-Hong Lee, Keon Jin Park, Dongsu Kang, Chi-Dug Oh, Sae-Ock Han, Myoung-Eun Kim, Yun Hak Lee, Dongjun Front Genet Genetics Transmembrane p24 trafficking protein 3 (TMED3) is a metastatic suppressor in colon cancer and hepatocellular carcinoma. However, its function in the progression of clear cell renal cell carcinoma (ccRCC) is unknown. Here, we report that TMED3 could be a new prognostic marker for ccRCC. Patient data were extracted from cohorts in the Cancer Genome Atlas (TCGA) and the International Cancer Genome Consortium (ICGC). Differential expression of TMED3 was observed between the low stage (Stage I and II) and high stage (Stage III and IV) patients in the TCGA and ICGC cohorts and between the low grade (Grade I and II) and high grade (Grade III and IV) patients in the TCGA cohort. Further, we evaluated TMED3 expression as a prognostic gene using Kaplan-Meier survival analysis, multivariate analysis, the time-dependent area under the curve (AUC) of Uno’s C-index, and the AUC of the receiver operating characteristics at 5 years. The Kaplan-Meier analysis revealed that TMED3 overexpression was associated with poor prognosis for ccRCC patients. Analysis of the C-indices and area under the receiver operating characteristic curve further supported this. Multivariate analysis confirmed the prognostic significance of TMED3 expression levels (P = 0.005 and 0.006 for TCGA and ICGC, respectively). Taken together, these findings demonstrate that TMED3 is a potential prognostic factor for ccRCC. Frontiers Media S.A. 2019-04-17 /pmc/articles/PMC6478656/ /pubmed/31057605 http://dx.doi.org/10.3389/fgene.2019.00355 Text en Copyright © 2019 Ha, Moon, Choi, Kang, Kim, Lee, Park, Kang, Oh, Han, Kim and Lee. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Genetics Ha, Mihyang Moon, Hwan Choi, Dongwook Kang, Wonmo Kim, Ji-Hong Lee, Keon Jin Park, Dongsu Kang, Chi-Dug Oh, Sae-Ock Han, Myoung-Eun Kim, Yun Hak Lee, Dongjun Prognostic Role of TMED3 in Clear Cell Renal Cell Carcinoma: A Retrospective Multi-Cohort Analysis |
title | Prognostic Role of TMED3 in Clear Cell Renal Cell Carcinoma: A Retrospective Multi-Cohort Analysis |
title_full | Prognostic Role of TMED3 in Clear Cell Renal Cell Carcinoma: A Retrospective Multi-Cohort Analysis |
title_fullStr | Prognostic Role of TMED3 in Clear Cell Renal Cell Carcinoma: A Retrospective Multi-Cohort Analysis |
title_full_unstemmed | Prognostic Role of TMED3 in Clear Cell Renal Cell Carcinoma: A Retrospective Multi-Cohort Analysis |
title_short | Prognostic Role of TMED3 in Clear Cell Renal Cell Carcinoma: A Retrospective Multi-Cohort Analysis |
title_sort | prognostic role of tmed3 in clear cell renal cell carcinoma: a retrospective multi-cohort analysis |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6478656/ https://www.ncbi.nlm.nih.gov/pubmed/31057605 http://dx.doi.org/10.3389/fgene.2019.00355 |
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