Cargando…
Population structure determines the tradeoff between fixation probability and fixation time
The rate of biological evolution depends on the fixation probability and on the fixation time of new mutants. Intensive research has focused on identifying population structures that augment the fixation probability of advantageous mutants. But these amplifiers of natural selection typically increas...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6478818/ https://www.ncbi.nlm.nih.gov/pubmed/31044163 http://dx.doi.org/10.1038/s42003-019-0373-y |
_version_ | 1783413220012195840 |
---|---|
author | Tkadlec, Josef Pavlogiannis, Andreas Chatterjee, Krishnendu Nowak, Martin A. |
author_facet | Tkadlec, Josef Pavlogiannis, Andreas Chatterjee, Krishnendu Nowak, Martin A. |
author_sort | Tkadlec, Josef |
collection | PubMed |
description | The rate of biological evolution depends on the fixation probability and on the fixation time of new mutants. Intensive research has focused on identifying population structures that augment the fixation probability of advantageous mutants. But these amplifiers of natural selection typically increase fixation time. Here we study population structures that achieve a tradeoff between fixation probability and time. First, we show that no amplifiers can have an asymptotically lower absorption time than the well-mixed population. Then we design population structures that substantially augment the fixation probability with just a minor increase in fixation time. Finally, we show that those structures enable higher effective rate of evolution than the well-mixed population provided that the rate of generating advantageous mutants is relatively low. Our work sheds light on how population structure affects the rate of evolution. Moreover, our structures could be useful for lab-based, medical, or industrial applications of evolutionary optimization. |
format | Online Article Text |
id | pubmed-6478818 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-64788182019-05-01 Population structure determines the tradeoff between fixation probability and fixation time Tkadlec, Josef Pavlogiannis, Andreas Chatterjee, Krishnendu Nowak, Martin A. Commun Biol Article The rate of biological evolution depends on the fixation probability and on the fixation time of new mutants. Intensive research has focused on identifying population structures that augment the fixation probability of advantageous mutants. But these amplifiers of natural selection typically increase fixation time. Here we study population structures that achieve a tradeoff between fixation probability and time. First, we show that no amplifiers can have an asymptotically lower absorption time than the well-mixed population. Then we design population structures that substantially augment the fixation probability with just a minor increase in fixation time. Finally, we show that those structures enable higher effective rate of evolution than the well-mixed population provided that the rate of generating advantageous mutants is relatively low. Our work sheds light on how population structure affects the rate of evolution. Moreover, our structures could be useful for lab-based, medical, or industrial applications of evolutionary optimization. Nature Publishing Group UK 2019-04-23 /pmc/articles/PMC6478818/ /pubmed/31044163 http://dx.doi.org/10.1038/s42003-019-0373-y Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Tkadlec, Josef Pavlogiannis, Andreas Chatterjee, Krishnendu Nowak, Martin A. Population structure determines the tradeoff between fixation probability and fixation time |
title | Population structure determines the tradeoff between fixation probability and fixation time |
title_full | Population structure determines the tradeoff between fixation probability and fixation time |
title_fullStr | Population structure determines the tradeoff between fixation probability and fixation time |
title_full_unstemmed | Population structure determines the tradeoff between fixation probability and fixation time |
title_short | Population structure determines the tradeoff between fixation probability and fixation time |
title_sort | population structure determines the tradeoff between fixation probability and fixation time |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6478818/ https://www.ncbi.nlm.nih.gov/pubmed/31044163 http://dx.doi.org/10.1038/s42003-019-0373-y |
work_keys_str_mv | AT tkadlecjosef populationstructuredeterminesthetradeoffbetweenfixationprobabilityandfixationtime AT pavlogiannisandreas populationstructuredeterminesthetradeoffbetweenfixationprobabilityandfixationtime AT chatterjeekrishnendu populationstructuredeterminesthetradeoffbetweenfixationprobabilityandfixationtime AT nowakmartina populationstructuredeterminesthetradeoffbetweenfixationprobabilityandfixationtime |