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Disulfide Bond Engineering of an Endoglucanase from Penicillium verruculosum to Improve Its Thermostability

Endoglucanases (EGLs) are important components of multienzyme cocktails used in the production of a wide variety of fine and bulk chemicals from lignocellulosic feedstocks. However, a low thermostability and the loss of catalytic performance of EGLs at industrially required temperatures limit their...

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Autores principales: Bashirova, Anna, Pramanik, Subrata, Volkov, Pavel, Rozhkova, Aleksandra, Nemashkalov, Vitaly, Zorov, Ivan, Gusakov, Alexander, Sinitsyn, Arkady, Schwaneberg, Ulrich, Davari, Mehdi D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6479618/
https://www.ncbi.nlm.nih.gov/pubmed/30935060
http://dx.doi.org/10.3390/ijms20071602
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author Bashirova, Anna
Pramanik, Subrata
Volkov, Pavel
Rozhkova, Aleksandra
Nemashkalov, Vitaly
Zorov, Ivan
Gusakov, Alexander
Sinitsyn, Arkady
Schwaneberg, Ulrich
Davari, Mehdi D.
author_facet Bashirova, Anna
Pramanik, Subrata
Volkov, Pavel
Rozhkova, Aleksandra
Nemashkalov, Vitaly
Zorov, Ivan
Gusakov, Alexander
Sinitsyn, Arkady
Schwaneberg, Ulrich
Davari, Mehdi D.
author_sort Bashirova, Anna
collection PubMed
description Endoglucanases (EGLs) are important components of multienzyme cocktails used in the production of a wide variety of fine and bulk chemicals from lignocellulosic feedstocks. However, a low thermostability and the loss of catalytic performance of EGLs at industrially required temperatures limit their commercial applications. A structure-based disulfide bond (DSB) engineering was carried out in order to improve the thermostability of EGLII from Penicillium verruculosum. Based on in silico prediction, two improved enzyme variants, S127C-A165C (DSB2) and Y171C-L201C (DSB3), were obtained. Both engineered enzymes displayed a 15–21% increase in specific activity against carboxymethylcellulose and β-glucan compared to the wild-type EGLII (EGLII-wt). After incubation at 70 °C for 2 h, they retained 52–58% of their activity, while EGLII-wt retained only 38% of its activity. At 80 °C, the enzyme-engineered forms retained 15–22% of their activity after 2 h, whereas EGLII-wt was completely inactivated after the same incubation time. Molecular dynamics simulations revealed that the introduced DSB rigidified a global structure of DSB2 and DSB3 variants, thus enhancing their thermostability. In conclusion, this work provides an insight into DSB protein engineering as a potential rational design strategy that might be applicable for improving the stability of other enzymes for industrial applications.
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spelling pubmed-64796182019-04-29 Disulfide Bond Engineering of an Endoglucanase from Penicillium verruculosum to Improve Its Thermostability Bashirova, Anna Pramanik, Subrata Volkov, Pavel Rozhkova, Aleksandra Nemashkalov, Vitaly Zorov, Ivan Gusakov, Alexander Sinitsyn, Arkady Schwaneberg, Ulrich Davari, Mehdi D. Int J Mol Sci Article Endoglucanases (EGLs) are important components of multienzyme cocktails used in the production of a wide variety of fine and bulk chemicals from lignocellulosic feedstocks. However, a low thermostability and the loss of catalytic performance of EGLs at industrially required temperatures limit their commercial applications. A structure-based disulfide bond (DSB) engineering was carried out in order to improve the thermostability of EGLII from Penicillium verruculosum. Based on in silico prediction, two improved enzyme variants, S127C-A165C (DSB2) and Y171C-L201C (DSB3), were obtained. Both engineered enzymes displayed a 15–21% increase in specific activity against carboxymethylcellulose and β-glucan compared to the wild-type EGLII (EGLII-wt). After incubation at 70 °C for 2 h, they retained 52–58% of their activity, while EGLII-wt retained only 38% of its activity. At 80 °C, the enzyme-engineered forms retained 15–22% of their activity after 2 h, whereas EGLII-wt was completely inactivated after the same incubation time. Molecular dynamics simulations revealed that the introduced DSB rigidified a global structure of DSB2 and DSB3 variants, thus enhancing their thermostability. In conclusion, this work provides an insight into DSB protein engineering as a potential rational design strategy that might be applicable for improving the stability of other enzymes for industrial applications. MDPI 2019-03-30 /pmc/articles/PMC6479618/ /pubmed/30935060 http://dx.doi.org/10.3390/ijms20071602 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Bashirova, Anna
Pramanik, Subrata
Volkov, Pavel
Rozhkova, Aleksandra
Nemashkalov, Vitaly
Zorov, Ivan
Gusakov, Alexander
Sinitsyn, Arkady
Schwaneberg, Ulrich
Davari, Mehdi D.
Disulfide Bond Engineering of an Endoglucanase from Penicillium verruculosum to Improve Its Thermostability
title Disulfide Bond Engineering of an Endoglucanase from Penicillium verruculosum to Improve Its Thermostability
title_full Disulfide Bond Engineering of an Endoglucanase from Penicillium verruculosum to Improve Its Thermostability
title_fullStr Disulfide Bond Engineering of an Endoglucanase from Penicillium verruculosum to Improve Its Thermostability
title_full_unstemmed Disulfide Bond Engineering of an Endoglucanase from Penicillium verruculosum to Improve Its Thermostability
title_short Disulfide Bond Engineering of an Endoglucanase from Penicillium verruculosum to Improve Its Thermostability
title_sort disulfide bond engineering of an endoglucanase from penicillium verruculosum to improve its thermostability
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6479618/
https://www.ncbi.nlm.nih.gov/pubmed/30935060
http://dx.doi.org/10.3390/ijms20071602
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