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Detection and Classification of Root and Butt-Rot (RBR) in Stumps of Norway Spruce Using RGB Images and Machine Learning

Root and butt-rot (RBR) has a significant impact on both the material and economic outcome of timber harvesting, and therewith on the individual forest owner and collectively on the forest and wood processing industries. An accurate recording of the presence of RBR during timber harvesting would ena...

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Autores principales: Ostovar, Ahmad, Talbot, Bruce, Puliti, Stefano, Astrup, Rasmus, Ringdahl, Ola
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6479852/
https://www.ncbi.nlm.nih.gov/pubmed/30939827
http://dx.doi.org/10.3390/s19071579
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author Ostovar, Ahmad
Talbot, Bruce
Puliti, Stefano
Astrup, Rasmus
Ringdahl, Ola
author_facet Ostovar, Ahmad
Talbot, Bruce
Puliti, Stefano
Astrup, Rasmus
Ringdahl, Ola
author_sort Ostovar, Ahmad
collection PubMed
description Root and butt-rot (RBR) has a significant impact on both the material and economic outcome of timber harvesting, and therewith on the individual forest owner and collectively on the forest and wood processing industries. An accurate recording of the presence of RBR during timber harvesting would enable a mapping of the location and extent of the problem, providing a basis for evaluating spread in a climate anticipated to enhance pathogenic growth in the future. Therefore, a system to automatically identify and detect the presence of RBR would constitute an important contribution to addressing the problem without increasing workload complexity for the machine operator. In this study, we developed and evaluated an approach based on RGB images to automatically detect tree stumps and classify them as to the absence or presence of rot. Furthermore, since knowledge of the extent of RBR is valuable in categorizing logs, we also classify stumps into three classes of infestation; rot = 0%, 0% < rot < 50% and rot ≥ 50%. In this work we used deep-learning approaches and conventional machine-learning algorithms for detection and classification tasks. The results showed that tree stumps were detected with precision rate of 95% and recall of 80%. Using only the correct output (TP) of the stump detector, stumps without and with RBR were correctly classified with accuracy of 83.5% and 77.5%, respectively. Classifying rot into three classes resulted in 79.4%, 72.4%, and 74.1% accuracy for stumps with rot = 0%, 0% < rot < 50%, and rot ≥ 50%, respectively. With some modifications, the developed algorithm could be used either during the harvesting operation to detect RBR regions on the tree stumps or as an RBR detector for post-harvest assessment of tree stumps and logs.
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spelling pubmed-64798522019-04-29 Detection and Classification of Root and Butt-Rot (RBR) in Stumps of Norway Spruce Using RGB Images and Machine Learning Ostovar, Ahmad Talbot, Bruce Puliti, Stefano Astrup, Rasmus Ringdahl, Ola Sensors (Basel) Article Root and butt-rot (RBR) has a significant impact on both the material and economic outcome of timber harvesting, and therewith on the individual forest owner and collectively on the forest and wood processing industries. An accurate recording of the presence of RBR during timber harvesting would enable a mapping of the location and extent of the problem, providing a basis for evaluating spread in a climate anticipated to enhance pathogenic growth in the future. Therefore, a system to automatically identify and detect the presence of RBR would constitute an important contribution to addressing the problem without increasing workload complexity for the machine operator. In this study, we developed and evaluated an approach based on RGB images to automatically detect tree stumps and classify them as to the absence or presence of rot. Furthermore, since knowledge of the extent of RBR is valuable in categorizing logs, we also classify stumps into three classes of infestation; rot = 0%, 0% < rot < 50% and rot ≥ 50%. In this work we used deep-learning approaches and conventional machine-learning algorithms for detection and classification tasks. The results showed that tree stumps were detected with precision rate of 95% and recall of 80%. Using only the correct output (TP) of the stump detector, stumps without and with RBR were correctly classified with accuracy of 83.5% and 77.5%, respectively. Classifying rot into three classes resulted in 79.4%, 72.4%, and 74.1% accuracy for stumps with rot = 0%, 0% < rot < 50%, and rot ≥ 50%, respectively. With some modifications, the developed algorithm could be used either during the harvesting operation to detect RBR regions on the tree stumps or as an RBR detector for post-harvest assessment of tree stumps and logs. MDPI 2019-04-01 /pmc/articles/PMC6479852/ /pubmed/30939827 http://dx.doi.org/10.3390/s19071579 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Ostovar, Ahmad
Talbot, Bruce
Puliti, Stefano
Astrup, Rasmus
Ringdahl, Ola
Detection and Classification of Root and Butt-Rot (RBR) in Stumps of Norway Spruce Using RGB Images and Machine Learning
title Detection and Classification of Root and Butt-Rot (RBR) in Stumps of Norway Spruce Using RGB Images and Machine Learning
title_full Detection and Classification of Root and Butt-Rot (RBR) in Stumps of Norway Spruce Using RGB Images and Machine Learning
title_fullStr Detection and Classification of Root and Butt-Rot (RBR) in Stumps of Norway Spruce Using RGB Images and Machine Learning
title_full_unstemmed Detection and Classification of Root and Butt-Rot (RBR) in Stumps of Norway Spruce Using RGB Images and Machine Learning
title_short Detection and Classification of Root and Butt-Rot (RBR) in Stumps of Norway Spruce Using RGB Images and Machine Learning
title_sort detection and classification of root and butt-rot (rbr) in stumps of norway spruce using rgb images and machine learning
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6479852/
https://www.ncbi.nlm.nih.gov/pubmed/30939827
http://dx.doi.org/10.3390/s19071579
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