Cargando…
Genome-Wide Characterization, Evolution, and Expression Profiling of VQ Gene Family in Response to Phytohormone Treatments and Abiotic Stress in Eucalyptus grandis
VQ genes play important roles in plant development, growth, and stress responses. However, little information regarding the functions of VQ genes is available for Eucalyptus grandis. In our study, genome-wide characterization and identification of VQ genes were performed in E. grandis. Results showe...
Autores principales: | , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6480042/ https://www.ncbi.nlm.nih.gov/pubmed/30974801 http://dx.doi.org/10.3390/ijms20071765 |
_version_ | 1783413484994691072 |
---|---|
author | Yan, Huifang Wang, Yujiao Hu, Bing Qiu, Zhenfei Zeng, Bingshan Fan, Chunjie |
author_facet | Yan, Huifang Wang, Yujiao Hu, Bing Qiu, Zhenfei Zeng, Bingshan Fan, Chunjie |
author_sort | Yan, Huifang |
collection | PubMed |
description | VQ genes play important roles in plant development, growth, and stress responses. However, little information regarding the functions of VQ genes is available for Eucalyptus grandis. In our study, genome-wide characterization and identification of VQ genes were performed in E. grandis. Results showed that 27 VQ genes, which divided into seven sub-families (I–VII), were found, and all but two VQ genes showed no intron by gene structure and conserved motif analysis. To further identify the function of EgrVQ proteins, gene expression analyses were also developed under hormone treatments (brassinosteroids, methyl jasmonate, salicylic acid, and abscisic acid) and abiotic conditions (salt stress, cold 4 °C, and heat 42 °C). The results of a quantitative real-time PCR analysis indicated that the EgrVQs were variously expressed under different hormone treatments and abiotic stressors. Our study provides a comprehensive overview of VQ genes in E. grandis, which will be beneficial in the molecular breeding of E. grandis to promote its resistance to abiotic stressors; the results also provide a basis from which to conduct further investigation into the functions of VQ genes in E. grandis. |
format | Online Article Text |
id | pubmed-6480042 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-64800422019-04-29 Genome-Wide Characterization, Evolution, and Expression Profiling of VQ Gene Family in Response to Phytohormone Treatments and Abiotic Stress in Eucalyptus grandis Yan, Huifang Wang, Yujiao Hu, Bing Qiu, Zhenfei Zeng, Bingshan Fan, Chunjie Int J Mol Sci Article VQ genes play important roles in plant development, growth, and stress responses. However, little information regarding the functions of VQ genes is available for Eucalyptus grandis. In our study, genome-wide characterization and identification of VQ genes were performed in E. grandis. Results showed that 27 VQ genes, which divided into seven sub-families (I–VII), were found, and all but two VQ genes showed no intron by gene structure and conserved motif analysis. To further identify the function of EgrVQ proteins, gene expression analyses were also developed under hormone treatments (brassinosteroids, methyl jasmonate, salicylic acid, and abscisic acid) and abiotic conditions (salt stress, cold 4 °C, and heat 42 °C). The results of a quantitative real-time PCR analysis indicated that the EgrVQs were variously expressed under different hormone treatments and abiotic stressors. Our study provides a comprehensive overview of VQ genes in E. grandis, which will be beneficial in the molecular breeding of E. grandis to promote its resistance to abiotic stressors; the results also provide a basis from which to conduct further investigation into the functions of VQ genes in E. grandis. MDPI 2019-04-10 /pmc/articles/PMC6480042/ /pubmed/30974801 http://dx.doi.org/10.3390/ijms20071765 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Yan, Huifang Wang, Yujiao Hu, Bing Qiu, Zhenfei Zeng, Bingshan Fan, Chunjie Genome-Wide Characterization, Evolution, and Expression Profiling of VQ Gene Family in Response to Phytohormone Treatments and Abiotic Stress in Eucalyptus grandis |
title | Genome-Wide Characterization, Evolution, and Expression Profiling of VQ Gene Family in Response to Phytohormone Treatments and Abiotic Stress in Eucalyptus grandis |
title_full | Genome-Wide Characterization, Evolution, and Expression Profiling of VQ Gene Family in Response to Phytohormone Treatments and Abiotic Stress in Eucalyptus grandis |
title_fullStr | Genome-Wide Characterization, Evolution, and Expression Profiling of VQ Gene Family in Response to Phytohormone Treatments and Abiotic Stress in Eucalyptus grandis |
title_full_unstemmed | Genome-Wide Characterization, Evolution, and Expression Profiling of VQ Gene Family in Response to Phytohormone Treatments and Abiotic Stress in Eucalyptus grandis |
title_short | Genome-Wide Characterization, Evolution, and Expression Profiling of VQ Gene Family in Response to Phytohormone Treatments and Abiotic Stress in Eucalyptus grandis |
title_sort | genome-wide characterization, evolution, and expression profiling of vq gene family in response to phytohormone treatments and abiotic stress in eucalyptus grandis |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6480042/ https://www.ncbi.nlm.nih.gov/pubmed/30974801 http://dx.doi.org/10.3390/ijms20071765 |
work_keys_str_mv | AT yanhuifang genomewidecharacterizationevolutionandexpressionprofilingofvqgenefamilyinresponsetophytohormonetreatmentsandabioticstressineucalyptusgrandis AT wangyujiao genomewidecharacterizationevolutionandexpressionprofilingofvqgenefamilyinresponsetophytohormonetreatmentsandabioticstressineucalyptusgrandis AT hubing genomewidecharacterizationevolutionandexpressionprofilingofvqgenefamilyinresponsetophytohormonetreatmentsandabioticstressineucalyptusgrandis AT qiuzhenfei genomewidecharacterizationevolutionandexpressionprofilingofvqgenefamilyinresponsetophytohormonetreatmentsandabioticstressineucalyptusgrandis AT zengbingshan genomewidecharacterizationevolutionandexpressionprofilingofvqgenefamilyinresponsetophytohormonetreatmentsandabioticstressineucalyptusgrandis AT fanchunjie genomewidecharacterizationevolutionandexpressionprofilingofvqgenefamilyinresponsetophytohormonetreatmentsandabioticstressineucalyptusgrandis |