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Preprocessing Ground-Based Visible/Near Infrared Imaging Spectroscopy Data Affected by Smile Effects

A data set of very high-resolution visible/near infrared hyperspectral images of young Pinus contorta trees was recorded to study the effects of herbicides on this invasive species. The camera was fixed on a frame while the potted trees were moved underneath on a conveyor belt. To account for changi...

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Detalles Bibliográficos
Autores principales: Buddenbaum, Henning, Watt, Michael S., Scholten, Rebecca C., Hill, Joachim
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6480459/
https://www.ncbi.nlm.nih.gov/pubmed/30935004
http://dx.doi.org/10.3390/s19071543
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author Buddenbaum, Henning
Watt, Michael S.
Scholten, Rebecca C.
Hill, Joachim
author_facet Buddenbaum, Henning
Watt, Michael S.
Scholten, Rebecca C.
Hill, Joachim
author_sort Buddenbaum, Henning
collection PubMed
description A data set of very high-resolution visible/near infrared hyperspectral images of young Pinus contorta trees was recorded to study the effects of herbicides on this invasive species. The camera was fixed on a frame while the potted trees were moved underneath on a conveyor belt. To account for changing illumination conditions, a white reference bar was included at the edge of each image line. Conventional preprocessing of the images, i.e., dividing measured values by values from the white reference bar in the same image line, failed and resulted in bad quality spectra with oscillation patterns that are most likely due to wavelength shifts across the sensor’s field of view (smile effect). An additional hyperspectral data set of a Spectralon white reference panel could be used to characterize and correct the oscillations introduced by the division, resulting in a high quality spectra that document the effects of herbicides on the reflectance characteristics of coniferous trees. While the spectra of untreated trees remained constant over time, there were clear temporal changes in the spectra of trees treated with both herbicides. One herbicide worked within days, the other one within weeks. Ground-based imaging spectroscopy with meaningful preprocessing proved to be an appropriate tool for monitoring the effects of herbicides on potted plants.
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spelling pubmed-64804592019-04-29 Preprocessing Ground-Based Visible/Near Infrared Imaging Spectroscopy Data Affected by Smile Effects Buddenbaum, Henning Watt, Michael S. Scholten, Rebecca C. Hill, Joachim Sensors (Basel) Communication A data set of very high-resolution visible/near infrared hyperspectral images of young Pinus contorta trees was recorded to study the effects of herbicides on this invasive species. The camera was fixed on a frame while the potted trees were moved underneath on a conveyor belt. To account for changing illumination conditions, a white reference bar was included at the edge of each image line. Conventional preprocessing of the images, i.e., dividing measured values by values from the white reference bar in the same image line, failed and resulted in bad quality spectra with oscillation patterns that are most likely due to wavelength shifts across the sensor’s field of view (smile effect). An additional hyperspectral data set of a Spectralon white reference panel could be used to characterize and correct the oscillations introduced by the division, resulting in a high quality spectra that document the effects of herbicides on the reflectance characteristics of coniferous trees. While the spectra of untreated trees remained constant over time, there were clear temporal changes in the spectra of trees treated with both herbicides. One herbicide worked within days, the other one within weeks. Ground-based imaging spectroscopy with meaningful preprocessing proved to be an appropriate tool for monitoring the effects of herbicides on potted plants. MDPI 2019-03-30 /pmc/articles/PMC6480459/ /pubmed/30935004 http://dx.doi.org/10.3390/s19071543 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Communication
Buddenbaum, Henning
Watt, Michael S.
Scholten, Rebecca C.
Hill, Joachim
Preprocessing Ground-Based Visible/Near Infrared Imaging Spectroscopy Data Affected by Smile Effects
title Preprocessing Ground-Based Visible/Near Infrared Imaging Spectroscopy Data Affected by Smile Effects
title_full Preprocessing Ground-Based Visible/Near Infrared Imaging Spectroscopy Data Affected by Smile Effects
title_fullStr Preprocessing Ground-Based Visible/Near Infrared Imaging Spectroscopy Data Affected by Smile Effects
title_full_unstemmed Preprocessing Ground-Based Visible/Near Infrared Imaging Spectroscopy Data Affected by Smile Effects
title_short Preprocessing Ground-Based Visible/Near Infrared Imaging Spectroscopy Data Affected by Smile Effects
title_sort preprocessing ground-based visible/near infrared imaging spectroscopy data affected by smile effects
topic Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6480459/
https://www.ncbi.nlm.nih.gov/pubmed/30935004
http://dx.doi.org/10.3390/s19071543
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