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A microfluidic technique to estimate antigen expression on particles

Antigen expression is an important biomarker for cell analysis and disease diagnosis. Traditionally, antigen expression is measured using a flow cytometer which, due to its cost and labor intensive sample preparation, is unsuitable to be used at the point-of-care. Therefore, an automatic, miniaturiz...

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Autores principales: Ghonge, Tanmay, Ganguli, Anurup, Valera, Enrique, Saadah, Mariam, Damhorst, Gregory L., Berger, Jacob, Pagan Diaz, Gelson, Hassan, Umer, Chheda, Monish, Haidry, Zeeshan, Liu, Stan, Hwu, Carissa, Bashir, Rashid
Formato: Online Artículo Texto
Lenguaje:English
Publicado: AIP Publishing LLC 2017
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6481692/
https://www.ncbi.nlm.nih.gov/pubmed/31069283
http://dx.doi.org/10.1063/1.4989380
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author Ghonge, Tanmay
Ganguli, Anurup
Valera, Enrique
Saadah, Mariam
Damhorst, Gregory L.
Berger, Jacob
Pagan Diaz, Gelson
Hassan, Umer
Chheda, Monish
Haidry, Zeeshan
Liu, Stan
Hwu, Carissa
Bashir, Rashid
author_facet Ghonge, Tanmay
Ganguli, Anurup
Valera, Enrique
Saadah, Mariam
Damhorst, Gregory L.
Berger, Jacob
Pagan Diaz, Gelson
Hassan, Umer
Chheda, Monish
Haidry, Zeeshan
Liu, Stan
Hwu, Carissa
Bashir, Rashid
author_sort Ghonge, Tanmay
collection PubMed
description Antigen expression is an important biomarker for cell analysis and disease diagnosis. Traditionally, antigen expression is measured using a flow cytometer which, due to its cost and labor intensive sample preparation, is unsuitable to be used at the point-of-care. Therefore, an automatic, miniaturized assay which can measure antigen expression in the patient could aid in making crucial clinical decisions rapidly. Such a device would also expand the use of such an assay in basic research in biology. In this paper, we present a microfluidic device that can be used to measure antigen expression on cells. We demonstrate our approach using biotin-neutravidin as the binding pair using experimental and computational approaches. We flow beads with varying biotin surface densities (m(r)) through a polydimethylsiloxane channel with cylindrical pillars functionalized with neutravidin. We analyze how shear stress and collision angle, the angle at which the beads collide with the pillars, affect the angular location of beads captured on the pillars. We also find that the fraction of captured beads as a function of distance (γ) in the channel is affected by m(r). Using γ, we derive the probability of capture per collision with the pillar (ε). We show that ε is linearly related to m(r), which is analogous to the expression level of proteins on cell surfaces. Although demonstrated with beads, this assay can next be expanded with cells, thus paving the way for a rapid antigen expression test.
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spelling pubmed-64816922019-05-08 A microfluidic technique to estimate antigen expression on particles Ghonge, Tanmay Ganguli, Anurup Valera, Enrique Saadah, Mariam Damhorst, Gregory L. Berger, Jacob Pagan Diaz, Gelson Hassan, Umer Chheda, Monish Haidry, Zeeshan Liu, Stan Hwu, Carissa Bashir, Rashid APL Bioeng Articles Antigen expression is an important biomarker for cell analysis and disease diagnosis. Traditionally, antigen expression is measured using a flow cytometer which, due to its cost and labor intensive sample preparation, is unsuitable to be used at the point-of-care. Therefore, an automatic, miniaturized assay which can measure antigen expression in the patient could aid in making crucial clinical decisions rapidly. Such a device would also expand the use of such an assay in basic research in biology. In this paper, we present a microfluidic device that can be used to measure antigen expression on cells. We demonstrate our approach using biotin-neutravidin as the binding pair using experimental and computational approaches. We flow beads with varying biotin surface densities (m(r)) through a polydimethylsiloxane channel with cylindrical pillars functionalized with neutravidin. We analyze how shear stress and collision angle, the angle at which the beads collide with the pillars, affect the angular location of beads captured on the pillars. We also find that the fraction of captured beads as a function of distance (γ) in the channel is affected by m(r). Using γ, we derive the probability of capture per collision with the pillar (ε). We show that ε is linearly related to m(r), which is analogous to the expression level of proteins on cell surfaces. Although demonstrated with beads, this assay can next be expanded with cells, thus paving the way for a rapid antigen expression test. AIP Publishing LLC 2017-10-09 /pmc/articles/PMC6481692/ /pubmed/31069283 http://dx.doi.org/10.1063/1.4989380 Text en © 2017 Author(s). 2473-2877/2017/1(1)/016103/10 All article content, except where otherwise noted, is licensed under a Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Articles
Ghonge, Tanmay
Ganguli, Anurup
Valera, Enrique
Saadah, Mariam
Damhorst, Gregory L.
Berger, Jacob
Pagan Diaz, Gelson
Hassan, Umer
Chheda, Monish
Haidry, Zeeshan
Liu, Stan
Hwu, Carissa
Bashir, Rashid
A microfluidic technique to estimate antigen expression on particles
title A microfluidic technique to estimate antigen expression on particles
title_full A microfluidic technique to estimate antigen expression on particles
title_fullStr A microfluidic technique to estimate antigen expression on particles
title_full_unstemmed A microfluidic technique to estimate antigen expression on particles
title_short A microfluidic technique to estimate antigen expression on particles
title_sort microfluidic technique to estimate antigen expression on particles
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6481692/
https://www.ncbi.nlm.nih.gov/pubmed/31069283
http://dx.doi.org/10.1063/1.4989380
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