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PlantMP: a database for moonlighting plant proteins

Moonlighting proteins are single polypeptide chains capable of executing two or more distinct biochemical and/or biological functions. Here, we describe the development of PlantMP, which is a manually curated online-based database of plant proteins that are known to `moonlight’. The database contain...

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Detalles Bibliográficos
Autores principales: Su, Bo, Qian, Zhuang, Li, Tianshu, Zhou, Yuwei, Wong, Aloysius
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6482322/
https://www.ncbi.nlm.nih.gov/pubmed/31032837
http://dx.doi.org/10.1093/database/baz050
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author Su, Bo
Qian, Zhuang
Li, Tianshu
Zhou, Yuwei
Wong, Aloysius
author_facet Su, Bo
Qian, Zhuang
Li, Tianshu
Zhou, Yuwei
Wong, Aloysius
author_sort Su, Bo
collection PubMed
description Moonlighting proteins are single polypeptide chains capable of executing two or more distinct biochemical and/or biological functions. Here, we describe the development of PlantMP, which is a manually curated online-based database of plant proteins that are known to `moonlight’. The database contains searchable UniProt IDs and names, canonical and moonlighting functions, gene ontology numbers, plant species as well as links to the PubMed indexed articles. Proteins homologous to experimentally confirmed moonlighting proteins from the model plant Arabidopsis thaliana are provided as a separate list of `likely moonlighters’. Additionally, we also provide a list of predicted Arabidopsis moonlighting proteins reported in the literature. Currently, PlantMP contains 110 plant moonlighting proteins, 10 `likely moonlighters’ and 27 `predicted moonlighters’. Organizing plant moonlighting proteins in one platform enables researchers to conveniently harvest plant-specific raw and processed data such as the molecular functions, biological roles and structural features essential for hypothesis formulation in basic research and for biotechnological innovations.
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spelling pubmed-64823222019-04-29 PlantMP: a database for moonlighting plant proteins Su, Bo Qian, Zhuang Li, Tianshu Zhou, Yuwei Wong, Aloysius Database (Oxford) Database Tool Moonlighting proteins are single polypeptide chains capable of executing two or more distinct biochemical and/or biological functions. Here, we describe the development of PlantMP, which is a manually curated online-based database of plant proteins that are known to `moonlight’. The database contains searchable UniProt IDs and names, canonical and moonlighting functions, gene ontology numbers, plant species as well as links to the PubMed indexed articles. Proteins homologous to experimentally confirmed moonlighting proteins from the model plant Arabidopsis thaliana are provided as a separate list of `likely moonlighters’. Additionally, we also provide a list of predicted Arabidopsis moonlighting proteins reported in the literature. Currently, PlantMP contains 110 plant moonlighting proteins, 10 `likely moonlighters’ and 27 `predicted moonlighters’. Organizing plant moonlighting proteins in one platform enables researchers to conveniently harvest plant-specific raw and processed data such as the molecular functions, biological roles and structural features essential for hypothesis formulation in basic research and for biotechnological innovations. Oxford University Press 2019-04-25 /pmc/articles/PMC6482322/ /pubmed/31032837 http://dx.doi.org/10.1093/database/baz050 Text en © The Author(s) 2019. Published by Oxford University Press. http://creativecommons.org/licenses/by/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Database Tool
Su, Bo
Qian, Zhuang
Li, Tianshu
Zhou, Yuwei
Wong, Aloysius
PlantMP: a database for moonlighting plant proteins
title PlantMP: a database for moonlighting plant proteins
title_full PlantMP: a database for moonlighting plant proteins
title_fullStr PlantMP: a database for moonlighting plant proteins
title_full_unstemmed PlantMP: a database for moonlighting plant proteins
title_short PlantMP: a database for moonlighting plant proteins
title_sort plantmp: a database for moonlighting plant proteins
topic Database Tool
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6482322/
https://www.ncbi.nlm.nih.gov/pubmed/31032837
http://dx.doi.org/10.1093/database/baz050
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