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Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia
BACKGROUND: MiRNAs that are potential biomarkers for predicting prognosis for acute myeloid leukemia (AML) have been identified. However, comprehensive analyses investigating the association between miRNA expression profiles and AML survival remain relatively deficient. METHOD: In the present study,...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6483142/ https://www.ncbi.nlm.nih.gov/pubmed/30700251 http://dx.doi.org/10.1186/s12885-019-5315-z |
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author | Xue, Yao Ge, Yuqiu Kang, Meiyun Wu, Cong Wang, Yaping Rong, Liucheng Fang, Yongjun |
author_facet | Xue, Yao Ge, Yuqiu Kang, Meiyun Wu, Cong Wang, Yaping Rong, Liucheng Fang, Yongjun |
author_sort | Xue, Yao |
collection | PubMed |
description | BACKGROUND: MiRNAs that are potential biomarkers for predicting prognosis for acute myeloid leukemia (AML) have been identified. However, comprehensive analyses investigating the association between miRNA expression profiles and AML survival remain relatively deficient. METHOD: In the present study, we performed multivariate Cox’s analysis and principal component analysis (PCA) using data from The Cancer Genome Atlas (TCGA) to identify potential molecular signatures for predicting non-M3 AML prognosis. RESULT: We found that patients who were still living were significantly younger at diagnosis than those who had died (P = 0.001). In addition, there was a marked difference in living status among different risk category groups (P = 0.022). A multivariate Cox model suggested that three miRNAs were potential biomarkers of non-M3 AML prognosis, including miR-181a-2, miR-25 and miR-362. Subsequently, PCA analyses were conducted to comprehensively represent the expression levels of these three miRNAs in each patient with a PCA value. According to the log-rank test, AML outcome for patients with lower PCA values was significantly different from those with higher PCA values (P < 0.001). Further bioinformatic analysis revealed the biological functions of the selected miRNAs. CONCLUSION: We conducted a comprehensive analysis of TCGA non-M3 AML data, identifying three miRNAs that are significantly correlated with AML survival. PCA values for the identified miRNAs are valuable for predicting AML prognosis. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12885-019-5315-z) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6483142 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-64831422019-05-02 Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia Xue, Yao Ge, Yuqiu Kang, Meiyun Wu, Cong Wang, Yaping Rong, Liucheng Fang, Yongjun BMC Cancer Research Article BACKGROUND: MiRNAs that are potential biomarkers for predicting prognosis for acute myeloid leukemia (AML) have been identified. However, comprehensive analyses investigating the association between miRNA expression profiles and AML survival remain relatively deficient. METHOD: In the present study, we performed multivariate Cox’s analysis and principal component analysis (PCA) using data from The Cancer Genome Atlas (TCGA) to identify potential molecular signatures for predicting non-M3 AML prognosis. RESULT: We found that patients who were still living were significantly younger at diagnosis than those who had died (P = 0.001). In addition, there was a marked difference in living status among different risk category groups (P = 0.022). A multivariate Cox model suggested that three miRNAs were potential biomarkers of non-M3 AML prognosis, including miR-181a-2, miR-25 and miR-362. Subsequently, PCA analyses were conducted to comprehensively represent the expression levels of these three miRNAs in each patient with a PCA value. According to the log-rank test, AML outcome for patients with lower PCA values was significantly different from those with higher PCA values (P < 0.001). Further bioinformatic analysis revealed the biological functions of the selected miRNAs. CONCLUSION: We conducted a comprehensive analysis of TCGA non-M3 AML data, identifying three miRNAs that are significantly correlated with AML survival. PCA values for the identified miRNAs are valuable for predicting AML prognosis. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12885-019-5315-z) contains supplementary material, which is available to authorized users. BioMed Central 2019-01-30 /pmc/articles/PMC6483142/ /pubmed/30700251 http://dx.doi.org/10.1186/s12885-019-5315-z Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Xue, Yao Ge, Yuqiu Kang, Meiyun Wu, Cong Wang, Yaping Rong, Liucheng Fang, Yongjun Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia |
title | Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia |
title_full | Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia |
title_fullStr | Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia |
title_full_unstemmed | Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia |
title_short | Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia |
title_sort | selection of three mirna signatures with prognostic value in non-m3 acute myeloid leukemia |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6483142/ https://www.ncbi.nlm.nih.gov/pubmed/30700251 http://dx.doi.org/10.1186/s12885-019-5315-z |
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