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Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia

BACKGROUND: MiRNAs that are potential biomarkers for predicting prognosis for acute myeloid leukemia (AML) have been identified. However, comprehensive analyses investigating the association between miRNA expression profiles and AML survival remain relatively deficient. METHOD: In the present study,...

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Autores principales: Xue, Yao, Ge, Yuqiu, Kang, Meiyun, Wu, Cong, Wang, Yaping, Rong, Liucheng, Fang, Yongjun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6483142/
https://www.ncbi.nlm.nih.gov/pubmed/30700251
http://dx.doi.org/10.1186/s12885-019-5315-z
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author Xue, Yao
Ge, Yuqiu
Kang, Meiyun
Wu, Cong
Wang, Yaping
Rong, Liucheng
Fang, Yongjun
author_facet Xue, Yao
Ge, Yuqiu
Kang, Meiyun
Wu, Cong
Wang, Yaping
Rong, Liucheng
Fang, Yongjun
author_sort Xue, Yao
collection PubMed
description BACKGROUND: MiRNAs that are potential biomarkers for predicting prognosis for acute myeloid leukemia (AML) have been identified. However, comprehensive analyses investigating the association between miRNA expression profiles and AML survival remain relatively deficient. METHOD: In the present study, we performed multivariate Cox’s analysis and principal component analysis (PCA) using data from The Cancer Genome Atlas (TCGA) to identify potential molecular signatures for predicting non-M3 AML prognosis. RESULT: We found that patients who were still living were significantly younger at diagnosis than those who had died (P = 0.001). In addition, there was a marked difference in living status among different risk category groups (P = 0.022). A multivariate Cox model suggested that three miRNAs were potential biomarkers of non-M3 AML prognosis, including miR-181a-2, miR-25 and miR-362. Subsequently, PCA analyses were conducted to comprehensively represent the expression levels of these three miRNAs in each patient with a PCA value. According to the log-rank test, AML outcome for patients with lower PCA values was significantly different from those with higher PCA values (P < 0.001). Further bioinformatic analysis revealed the biological functions of the selected miRNAs. CONCLUSION: We conducted a comprehensive analysis of TCGA non-M3 AML data, identifying three miRNAs that are significantly correlated with AML survival. PCA values for the identified miRNAs are valuable for predicting AML prognosis. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12885-019-5315-z) contains supplementary material, which is available to authorized users.
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spelling pubmed-64831422019-05-02 Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia Xue, Yao Ge, Yuqiu Kang, Meiyun Wu, Cong Wang, Yaping Rong, Liucheng Fang, Yongjun BMC Cancer Research Article BACKGROUND: MiRNAs that are potential biomarkers for predicting prognosis for acute myeloid leukemia (AML) have been identified. However, comprehensive analyses investigating the association between miRNA expression profiles and AML survival remain relatively deficient. METHOD: In the present study, we performed multivariate Cox’s analysis and principal component analysis (PCA) using data from The Cancer Genome Atlas (TCGA) to identify potential molecular signatures for predicting non-M3 AML prognosis. RESULT: We found that patients who were still living were significantly younger at diagnosis than those who had died (P = 0.001). In addition, there was a marked difference in living status among different risk category groups (P = 0.022). A multivariate Cox model suggested that three miRNAs were potential biomarkers of non-M3 AML prognosis, including miR-181a-2, miR-25 and miR-362. Subsequently, PCA analyses were conducted to comprehensively represent the expression levels of these three miRNAs in each patient with a PCA value. According to the log-rank test, AML outcome for patients with lower PCA values was significantly different from those with higher PCA values (P < 0.001). Further bioinformatic analysis revealed the biological functions of the selected miRNAs. CONCLUSION: We conducted a comprehensive analysis of TCGA non-M3 AML data, identifying three miRNAs that are significantly correlated with AML survival. PCA values for the identified miRNAs are valuable for predicting AML prognosis. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12885-019-5315-z) contains supplementary material, which is available to authorized users. BioMed Central 2019-01-30 /pmc/articles/PMC6483142/ /pubmed/30700251 http://dx.doi.org/10.1186/s12885-019-5315-z Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated.
spellingShingle Research Article
Xue, Yao
Ge, Yuqiu
Kang, Meiyun
Wu, Cong
Wang, Yaping
Rong, Liucheng
Fang, Yongjun
Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia
title Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia
title_full Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia
title_fullStr Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia
title_full_unstemmed Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia
title_short Selection of three miRNA signatures with prognostic value in non-M3 acute myeloid leukemia
title_sort selection of three mirna signatures with prognostic value in non-m3 acute myeloid leukemia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6483142/
https://www.ncbi.nlm.nih.gov/pubmed/30700251
http://dx.doi.org/10.1186/s12885-019-5315-z
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