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A network approach for identifying and delimiting biogeographical regions

Biogeographical regions (geographically distinct assemblages of species and communities) constitute a cornerstone for ecology, biogeography, evolution and conservation biology. Species turnover measures are often used to quantify spatial biodiversity patterns, but algorithms based on similarity can...

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Detalles Bibliográficos
Autores principales: Vilhena, Daril A., Antonelli, Alexandre
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2015
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6485529/
https://www.ncbi.nlm.nih.gov/pubmed/25907961
http://dx.doi.org/10.1038/ncomms7848
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author Vilhena, Daril A.
Antonelli, Alexandre
author_facet Vilhena, Daril A.
Antonelli, Alexandre
author_sort Vilhena, Daril A.
collection PubMed
description Biogeographical regions (geographically distinct assemblages of species and communities) constitute a cornerstone for ecology, biogeography, evolution and conservation biology. Species turnover measures are often used to quantify spatial biodiversity patterns, but algorithms based on similarity can be sensitive to common sampling biases in species distribution data. Here we apply a community detection approach from network theory that incorporates complex, higher order presence-absence patterns. We demonstrate the performance of the method by applying it to all amphibian species in the world (c. 6,100 species), all vascular plant species of the USA (c. 17,600), and a hypothetical dataset containing a zone of biotic transition. In comparison with current methods, our approach tackles the challenges posed by transition zones and succeeds in retrieving a larger number of commonly recognised biogeographical regions. This method can be applied to generate objective, data derived identification and delimitation of the world’s biogeographical regions.
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spelling pubmed-64855292019-04-26 A network approach for identifying and delimiting biogeographical regions Vilhena, Daril A. Antonelli, Alexandre Nat Commun Article Biogeographical regions (geographically distinct assemblages of species and communities) constitute a cornerstone for ecology, biogeography, evolution and conservation biology. Species turnover measures are often used to quantify spatial biodiversity patterns, but algorithms based on similarity can be sensitive to common sampling biases in species distribution data. Here we apply a community detection approach from network theory that incorporates complex, higher order presence-absence patterns. We demonstrate the performance of the method by applying it to all amphibian species in the world (c. 6,100 species), all vascular plant species of the USA (c. 17,600), and a hypothetical dataset containing a zone of biotic transition. In comparison with current methods, our approach tackles the challenges posed by transition zones and succeeds in retrieving a larger number of commonly recognised biogeographical regions. This method can be applied to generate objective, data derived identification and delimitation of the world’s biogeographical regions. 2015-04-24 /pmc/articles/PMC6485529/ /pubmed/25907961 http://dx.doi.org/10.1038/ncomms7848 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Vilhena, Daril A.
Antonelli, Alexandre
A network approach for identifying and delimiting biogeographical regions
title A network approach for identifying and delimiting biogeographical regions
title_full A network approach for identifying and delimiting biogeographical regions
title_fullStr A network approach for identifying and delimiting biogeographical regions
title_full_unstemmed A network approach for identifying and delimiting biogeographical regions
title_short A network approach for identifying and delimiting biogeographical regions
title_sort network approach for identifying and delimiting biogeographical regions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6485529/
https://www.ncbi.nlm.nih.gov/pubmed/25907961
http://dx.doi.org/10.1038/ncomms7848
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