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Physical determinants of the self-replication of protein fibrils

The ability of biological molecules to replicate themselves, achieved with the aid of a complex cellular machinery, is the foundation of life. However, a range of aberrant processes involve the self-replication of pathological protein structures without any additional factors. A dramatic example is...

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Autores principales: Šarić, Anđela, Buell, Alexander K., Meisl, Georg, Michaels, Thomas C. T., Dobson, Christopher M., Linse, Sara, Knowles, Tuomas P. J., Frenkel, Daan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2016
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6485595/
https://www.ncbi.nlm.nih.gov/pubmed/31031819
http://dx.doi.org/10.1038/nphys3828
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author Šarić, Anđela
Buell, Alexander K.
Meisl, Georg
Michaels, Thomas C. T.
Dobson, Christopher M.
Linse, Sara
Knowles, Tuomas P. J.
Frenkel, Daan
author_facet Šarić, Anđela
Buell, Alexander K.
Meisl, Georg
Michaels, Thomas C. T.
Dobson, Christopher M.
Linse, Sara
Knowles, Tuomas P. J.
Frenkel, Daan
author_sort Šarić, Anđela
collection PubMed
description The ability of biological molecules to replicate themselves, achieved with the aid of a complex cellular machinery, is the foundation of life. However, a range of aberrant processes involve the self-replication of pathological protein structures without any additional factors. A dramatic example is the autocatalytic replication of pathological protein aggregates, including amyloid fibrils and prions, involved in neurodegenerative disorders. Here, we use computer simulations to identify the necessary requirements for the self-replication of fibrillar assemblies of proteins. We establish that a key physical determinant for this process is the affinity of proteins for the surfaces of fibrils. We find that self-replication can only take place in a very narrow regime of inter-protein interactions, implying a high level of sensitivity to system parameters and experimental conditions. We then compare our theoretical predictions with kinetic and biosensor measurements of fibrils formed from the Aβ peptide associated with Alzheimer’s disease. Our results show a quantitative connection between the kinetics of self-replication and the surface coverage of fibrils by monomeric proteins. These findings reveal the fundamental physical requirements for the formation of supra-molecular structures able to replicate themselves, and shed light on mechanisms in play in the proliferation of protein aggregates in nature.
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spelling pubmed-64855952019-04-26 Physical determinants of the self-replication of protein fibrils Šarić, Anđela Buell, Alexander K. Meisl, Georg Michaels, Thomas C. T. Dobson, Christopher M. Linse, Sara Knowles, Tuomas P. J. Frenkel, Daan Nat Phys Article The ability of biological molecules to replicate themselves, achieved with the aid of a complex cellular machinery, is the foundation of life. However, a range of aberrant processes involve the self-replication of pathological protein structures without any additional factors. A dramatic example is the autocatalytic replication of pathological protein aggregates, including amyloid fibrils and prions, involved in neurodegenerative disorders. Here, we use computer simulations to identify the necessary requirements for the self-replication of fibrillar assemblies of proteins. We establish that a key physical determinant for this process is the affinity of proteins for the surfaces of fibrils. We find that self-replication can only take place in a very narrow regime of inter-protein interactions, implying a high level of sensitivity to system parameters and experimental conditions. We then compare our theoretical predictions with kinetic and biosensor measurements of fibrils formed from the Aβ peptide associated with Alzheimer’s disease. Our results show a quantitative connection between the kinetics of self-replication and the surface coverage of fibrils by monomeric proteins. These findings reveal the fundamental physical requirements for the formation of supra-molecular structures able to replicate themselves, and shed light on mechanisms in play in the proliferation of protein aggregates in nature. 2016-07-18 2016-09 /pmc/articles/PMC6485595/ /pubmed/31031819 http://dx.doi.org/10.1038/nphys3828 Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Šarić, Anđela
Buell, Alexander K.
Meisl, Georg
Michaels, Thomas C. T.
Dobson, Christopher M.
Linse, Sara
Knowles, Tuomas P. J.
Frenkel, Daan
Physical determinants of the self-replication of protein fibrils
title Physical determinants of the self-replication of protein fibrils
title_full Physical determinants of the self-replication of protein fibrils
title_fullStr Physical determinants of the self-replication of protein fibrils
title_full_unstemmed Physical determinants of the self-replication of protein fibrils
title_short Physical determinants of the self-replication of protein fibrils
title_sort physical determinants of the self-replication of protein fibrils
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6485595/
https://www.ncbi.nlm.nih.gov/pubmed/31031819
http://dx.doi.org/10.1038/nphys3828
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