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Modeling and Surveillance of Reporting Delays of Mosquitoes and Humans Infected With West Nile Virus and Associations With Accuracy of West Nile Virus Forecasts

IMPORTANCE: West Nile virus (WNV) is the leading cause of domestically acquired arboviral disease. OBJECTIVE: To develop real-time WNV forecasts of infected mosquitoes and human cases. DESIGN, SETTING, AND PARTICIPANTS: Real-time forecasts of WNV in 4 geographically dispersed locations in the United...

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Autores principales: DeFelice, Nicholas B., Birger, Ruthie, DeFelice, Nathaniel, Gagner, Alexandra, Campbell, Scott R., Romano, Christopher, Santoriello, Michael, Henke, Jennifer, Wittie, Jeremy, Cole, Barbara, Kaiser, Cameron, Shaman, Jeffrey
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Medical Association 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6487631/
https://www.ncbi.nlm.nih.gov/pubmed/31026036
http://dx.doi.org/10.1001/jamanetworkopen.2019.3175
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author DeFelice, Nicholas B.
Birger, Ruthie
DeFelice, Nathaniel
Gagner, Alexandra
Campbell, Scott R.
Romano, Christopher
Santoriello, Michael
Henke, Jennifer
Wittie, Jeremy
Cole, Barbara
Kaiser, Cameron
Shaman, Jeffrey
author_facet DeFelice, Nicholas B.
Birger, Ruthie
DeFelice, Nathaniel
Gagner, Alexandra
Campbell, Scott R.
Romano, Christopher
Santoriello, Michael
Henke, Jennifer
Wittie, Jeremy
Cole, Barbara
Kaiser, Cameron
Shaman, Jeffrey
author_sort DeFelice, Nicholas B.
collection PubMed
description IMPORTANCE: West Nile virus (WNV) is the leading cause of domestically acquired arboviral disease. OBJECTIVE: To develop real-time WNV forecasts of infected mosquitoes and human cases. DESIGN, SETTING, AND PARTICIPANTS: Real-time forecasts of WNV in 4 geographically dispersed locations in the United States were generated using a WNV model-inference forecasting system previously validated with retrospective data. Analysis was performed to evaluate how observational reporting delays of mosquito WNV assay results and human medical records were associated with real-time forecast accuracy. EXPOSURES: Mosquitoes positive for WNV and human cases. MAIN OUTCOMES AND MEASURES: Delays in reporting mosquito WNV assay results and human medical records and the association of these delays with real-time WNV forecast accuracy. RESULTS: Substantial delays in data reporting exist for both infected mosquitoes and human WNV cases. For human cases, confirmed data (n = 37) lagged behind the onset of illness by a mean (SD) of 5.5 (2.3) weeks (range, 2-14 weeks). These human case reporting lags reduced mean forecast accuracy for the total number of human cases over the season in 110 simulated outbreaks for 2 forecasting systems by 26% and 14%, from 2 weeks before to 3 weeks after the predicted peak of infected mosquitoes. This period is the time span during which 47% of human cases are reported. Of 7064 mosquito pools, 500 (7%) tested positive; the reporting lag for these data associated with viral testing at a state laboratory was a mean (SD) of 6.6 (2.6) days (range, 4-11 days). This reporting lag was associated with decreased mean forecast accuracy for the 3 mosquito infection indicators, timing, magnitude, and season, by approximately 5% for both forecasting systems. CONCLUSIONS AND RELEVANCE: Delays in reporting human WNV disease and infected mosquito information are associated with difficulties in outbreak surveillance and decreased real-time forecast accuracy. Infected mosquito lags were short enough that skillful forecasts could still be generated for mosquito infection indicators, but the human WNV case lags were too great to support accurate forecasting in real time. Forecasting WNV is potentially an important evidence-based decision support tool for public health officials and mosquito abatement districts; however, to operationalize real-time forecasting, more resources are needed to reduce human case reporting lags between illness onset and case confirmation.
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spelling pubmed-64876312019-05-03 Modeling and Surveillance of Reporting Delays of Mosquitoes and Humans Infected With West Nile Virus and Associations With Accuracy of West Nile Virus Forecasts DeFelice, Nicholas B. Birger, Ruthie DeFelice, Nathaniel Gagner, Alexandra Campbell, Scott R. Romano, Christopher Santoriello, Michael Henke, Jennifer Wittie, Jeremy Cole, Barbara Kaiser, Cameron Shaman, Jeffrey JAMA Netw Open Original Investigation IMPORTANCE: West Nile virus (WNV) is the leading cause of domestically acquired arboviral disease. OBJECTIVE: To develop real-time WNV forecasts of infected mosquitoes and human cases. DESIGN, SETTING, AND PARTICIPANTS: Real-time forecasts of WNV in 4 geographically dispersed locations in the United States were generated using a WNV model-inference forecasting system previously validated with retrospective data. Analysis was performed to evaluate how observational reporting delays of mosquito WNV assay results and human medical records were associated with real-time forecast accuracy. EXPOSURES: Mosquitoes positive for WNV and human cases. MAIN OUTCOMES AND MEASURES: Delays in reporting mosquito WNV assay results and human medical records and the association of these delays with real-time WNV forecast accuracy. RESULTS: Substantial delays in data reporting exist for both infected mosquitoes and human WNV cases. For human cases, confirmed data (n = 37) lagged behind the onset of illness by a mean (SD) of 5.5 (2.3) weeks (range, 2-14 weeks). These human case reporting lags reduced mean forecast accuracy for the total number of human cases over the season in 110 simulated outbreaks for 2 forecasting systems by 26% and 14%, from 2 weeks before to 3 weeks after the predicted peak of infected mosquitoes. This period is the time span during which 47% of human cases are reported. Of 7064 mosquito pools, 500 (7%) tested positive; the reporting lag for these data associated with viral testing at a state laboratory was a mean (SD) of 6.6 (2.6) days (range, 4-11 days). This reporting lag was associated with decreased mean forecast accuracy for the 3 mosquito infection indicators, timing, magnitude, and season, by approximately 5% for both forecasting systems. CONCLUSIONS AND RELEVANCE: Delays in reporting human WNV disease and infected mosquito information are associated with difficulties in outbreak surveillance and decreased real-time forecast accuracy. Infected mosquito lags were short enough that skillful forecasts could still be generated for mosquito infection indicators, but the human WNV case lags were too great to support accurate forecasting in real time. Forecasting WNV is potentially an important evidence-based decision support tool for public health officials and mosquito abatement districts; however, to operationalize real-time forecasting, more resources are needed to reduce human case reporting lags between illness onset and case confirmation. American Medical Association 2019-04-26 /pmc/articles/PMC6487631/ /pubmed/31026036 http://dx.doi.org/10.1001/jamanetworkopen.2019.3175 Text en Copyright 2019 DeFelice NB et al. JAMA Network Open. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the CC-BY License.
spellingShingle Original Investigation
DeFelice, Nicholas B.
Birger, Ruthie
DeFelice, Nathaniel
Gagner, Alexandra
Campbell, Scott R.
Romano, Christopher
Santoriello, Michael
Henke, Jennifer
Wittie, Jeremy
Cole, Barbara
Kaiser, Cameron
Shaman, Jeffrey
Modeling and Surveillance of Reporting Delays of Mosquitoes and Humans Infected With West Nile Virus and Associations With Accuracy of West Nile Virus Forecasts
title Modeling and Surveillance of Reporting Delays of Mosquitoes and Humans Infected With West Nile Virus and Associations With Accuracy of West Nile Virus Forecasts
title_full Modeling and Surveillance of Reporting Delays of Mosquitoes and Humans Infected With West Nile Virus and Associations With Accuracy of West Nile Virus Forecasts
title_fullStr Modeling and Surveillance of Reporting Delays of Mosquitoes and Humans Infected With West Nile Virus and Associations With Accuracy of West Nile Virus Forecasts
title_full_unstemmed Modeling and Surveillance of Reporting Delays of Mosquitoes and Humans Infected With West Nile Virus and Associations With Accuracy of West Nile Virus Forecasts
title_short Modeling and Surveillance of Reporting Delays of Mosquitoes and Humans Infected With West Nile Virus and Associations With Accuracy of West Nile Virus Forecasts
title_sort modeling and surveillance of reporting delays of mosquitoes and humans infected with west nile virus and associations with accuracy of west nile virus forecasts
topic Original Investigation
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6487631/
https://www.ncbi.nlm.nih.gov/pubmed/31026036
http://dx.doi.org/10.1001/jamanetworkopen.2019.3175
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