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Expression and clinical value of CD105 in renal cell carcinoma based on data mining in The Cancer Genome Atlas

The objective of the present study was to assess the expression of CD105 and its association with overall survival in three subtypes of renal cell carcinoma (RCC), namely clear cell (cc)RCC, papillary (p)RCC and chromophobe (ch)RCC. Data regarding the transcriptome and copy number of genes in RCC tu...

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Autores principales: Shi, Donghui, Che, Jianping, Yan, Yang, Peng, Bo, Yao, Xudong, Guo, Changcheng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6489005/
https://www.ncbi.nlm.nih.gov/pubmed/31086581
http://dx.doi.org/10.3892/etm.2019.7493
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author Shi, Donghui
Che, Jianping
Yan, Yang
Peng, Bo
Yao, Xudong
Guo, Changcheng
author_facet Shi, Donghui
Che, Jianping
Yan, Yang
Peng, Bo
Yao, Xudong
Guo, Changcheng
author_sort Shi, Donghui
collection PubMed
description The objective of the present study was to assess the expression of CD105 and its association with overall survival in three subtypes of renal cell carcinoma (RCC), namely clear cell (cc)RCC, papillary (p)RCC and chromophobe (ch)RCC. Data regarding the transcriptome and copy number of genes in RCC tumor samples and survival were obtained from The Cancer Genome Atlas. Bioinformatics analysis revealed that CD105 is overexpressed in ccRCC tumor tissue vs. normal renal tissue, and a higher CD105 copy number in ccRCC tissues was significantly associated with longer patient survival. The effect of the mRNA expression of CD105 in all three types of RCC and the copy number in pRCC and chRCC on patient survival was insignificant, but certain trends were observed. In addition, CD105 mRNA expression was associated with the metastasis and tumor stage, as well as pathological stage in ccRCC and pRCC. Pathway enrichment analysis revealed that CD105 may, through translation initiation of associated genes, promote RCC progression. The results of the present study suggest that in RCC tumors, the association of CD105 with different stages is complex. To evaluate the role of CD105 in RCC, its function should be assessed in addition to its expression. The exact influence of CD105 mRNA expression and copy number in RCC tumors on patient survival and the underlying mechanisms require further elucidation.
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spelling pubmed-64890052019-05-13 Expression and clinical value of CD105 in renal cell carcinoma based on data mining in The Cancer Genome Atlas Shi, Donghui Che, Jianping Yan, Yang Peng, Bo Yao, Xudong Guo, Changcheng Exp Ther Med Articles The objective of the present study was to assess the expression of CD105 and its association with overall survival in three subtypes of renal cell carcinoma (RCC), namely clear cell (cc)RCC, papillary (p)RCC and chromophobe (ch)RCC. Data regarding the transcriptome and copy number of genes in RCC tumor samples and survival were obtained from The Cancer Genome Atlas. Bioinformatics analysis revealed that CD105 is overexpressed in ccRCC tumor tissue vs. normal renal tissue, and a higher CD105 copy number in ccRCC tissues was significantly associated with longer patient survival. The effect of the mRNA expression of CD105 in all three types of RCC and the copy number in pRCC and chRCC on patient survival was insignificant, but certain trends were observed. In addition, CD105 mRNA expression was associated with the metastasis and tumor stage, as well as pathological stage in ccRCC and pRCC. Pathway enrichment analysis revealed that CD105 may, through translation initiation of associated genes, promote RCC progression. The results of the present study suggest that in RCC tumors, the association of CD105 with different stages is complex. To evaluate the role of CD105 in RCC, its function should be assessed in addition to its expression. The exact influence of CD105 mRNA expression and copy number in RCC tumors on patient survival and the underlying mechanisms require further elucidation. D.A. Spandidos 2019-06 2019-04-17 /pmc/articles/PMC6489005/ /pubmed/31086581 http://dx.doi.org/10.3892/etm.2019.7493 Text en Copyright: © Shi et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Shi, Donghui
Che, Jianping
Yan, Yang
Peng, Bo
Yao, Xudong
Guo, Changcheng
Expression and clinical value of CD105 in renal cell carcinoma based on data mining in The Cancer Genome Atlas
title Expression and clinical value of CD105 in renal cell carcinoma based on data mining in The Cancer Genome Atlas
title_full Expression and clinical value of CD105 in renal cell carcinoma based on data mining in The Cancer Genome Atlas
title_fullStr Expression and clinical value of CD105 in renal cell carcinoma based on data mining in The Cancer Genome Atlas
title_full_unstemmed Expression and clinical value of CD105 in renal cell carcinoma based on data mining in The Cancer Genome Atlas
title_short Expression and clinical value of CD105 in renal cell carcinoma based on data mining in The Cancer Genome Atlas
title_sort expression and clinical value of cd105 in renal cell carcinoma based on data mining in the cancer genome atlas
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6489005/
https://www.ncbi.nlm.nih.gov/pubmed/31086581
http://dx.doi.org/10.3892/etm.2019.7493
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