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State-dependent geometry of population activity in rat auditory cortex

The accuracy of the neural code depends on the relative embedding of signal and noise in the activity of neural populations. Despite a wealth of theoretical work on population codes, there are few empirical characterizations of the high-dimensional signal and noise subspaces. We studied the geometry...

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Autores principales: Kobak, Dmitry, Pardo-Vazquez, Jose L, Valente, Mafalda, Machens, Christian K, Renart, Alfonso
Formato: Online Artículo Texto
Lenguaje:English
Publicado: eLife Sciences Publications, Ltd 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6491041/
https://www.ncbi.nlm.nih.gov/pubmed/30969167
http://dx.doi.org/10.7554/eLife.44526
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author Kobak, Dmitry
Pardo-Vazquez, Jose L
Valente, Mafalda
Machens, Christian K
Renart, Alfonso
author_facet Kobak, Dmitry
Pardo-Vazquez, Jose L
Valente, Mafalda
Machens, Christian K
Renart, Alfonso
author_sort Kobak, Dmitry
collection PubMed
description The accuracy of the neural code depends on the relative embedding of signal and noise in the activity of neural populations. Despite a wealth of theoretical work on population codes, there are few empirical characterizations of the high-dimensional signal and noise subspaces. We studied the geometry of population codes in the rat auditory cortex across brain states along the activation-inactivation continuum, using sounds varying in difference and mean level across the ears. As the cortex becomes more activated, single-hemisphere populations go from preferring contralateral loud sounds to a symmetric preference across lateralizations and intensities, gain-modulation effectively disappears, and the signal and noise subspaces become approximately orthogonal to each other and to the direction corresponding to global activity modulations. Level-invariant decoding of sound lateralization also becomes possible in the active state. Our results provide an empirical foundation for the geometry and state-dependence of cortical population codes.
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spelling pubmed-64910412019-05-01 State-dependent geometry of population activity in rat auditory cortex Kobak, Dmitry Pardo-Vazquez, Jose L Valente, Mafalda Machens, Christian K Renart, Alfonso eLife Neuroscience The accuracy of the neural code depends on the relative embedding of signal and noise in the activity of neural populations. Despite a wealth of theoretical work on population codes, there are few empirical characterizations of the high-dimensional signal and noise subspaces. We studied the geometry of population codes in the rat auditory cortex across brain states along the activation-inactivation continuum, using sounds varying in difference and mean level across the ears. As the cortex becomes more activated, single-hemisphere populations go from preferring contralateral loud sounds to a symmetric preference across lateralizations and intensities, gain-modulation effectively disappears, and the signal and noise subspaces become approximately orthogonal to each other and to the direction corresponding to global activity modulations. Level-invariant decoding of sound lateralization also becomes possible in the active state. Our results provide an empirical foundation for the geometry and state-dependence of cortical population codes. eLife Sciences Publications, Ltd 2019-04-10 /pmc/articles/PMC6491041/ /pubmed/30969167 http://dx.doi.org/10.7554/eLife.44526 Text en © 2019, Kobak et al http://creativecommons.org/licenses/by/4.0/ http://creativecommons.org/licenses/by/4.0/This article is distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use and redistribution provided that the original author and source are credited.
spellingShingle Neuroscience
Kobak, Dmitry
Pardo-Vazquez, Jose L
Valente, Mafalda
Machens, Christian K
Renart, Alfonso
State-dependent geometry of population activity in rat auditory cortex
title State-dependent geometry of population activity in rat auditory cortex
title_full State-dependent geometry of population activity in rat auditory cortex
title_fullStr State-dependent geometry of population activity in rat auditory cortex
title_full_unstemmed State-dependent geometry of population activity in rat auditory cortex
title_short State-dependent geometry of population activity in rat auditory cortex
title_sort state-dependent geometry of population activity in rat auditory cortex
topic Neuroscience
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6491041/
https://www.ncbi.nlm.nih.gov/pubmed/30969167
http://dx.doi.org/10.7554/eLife.44526
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