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Sparsity and locally low rank regularization for MR fingerprinting

PURPOSE: Develop a sparse and locally low rank (LLR) regularized reconstruction to accelerate MR fingerprinting (MRF). METHODS: Recent works have introduced low rank reconstructions to MRF, based on temporal compression operators learned from the MRF dictionary. In other MR applications, LLR regular...

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Autores principales: Lima da Cruz, Gastão, Bustin, Aurélien, Jaubert, Oliver, Schneider, Torben, Botnar, René M., Prieto, Claudia
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6492150/
https://www.ncbi.nlm.nih.gov/pubmed/30720209
http://dx.doi.org/10.1002/mrm.27665
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author Lima da Cruz, Gastão
Bustin, Aurélien
Jaubert, Oliver
Schneider, Torben
Botnar, René M.
Prieto, Claudia
author_facet Lima da Cruz, Gastão
Bustin, Aurélien
Jaubert, Oliver
Schneider, Torben
Botnar, René M.
Prieto, Claudia
author_sort Lima da Cruz, Gastão
collection PubMed
description PURPOSE: Develop a sparse and locally low rank (LLR) regularized reconstruction to accelerate MR fingerprinting (MRF). METHODS: Recent works have introduced low rank reconstructions to MRF, based on temporal compression operators learned from the MRF dictionary. In other MR applications, LLR regularization has been introduced to exploit temporal redundancy in local regions of the image. Here, we propose to include spatial sparsity and LLR regularization terms in the MRF reconstruction. This approach, so called SLLR‐MRF, further reduces aliasing in the time‐point images and enables higher acceleration factors. The proposed approach was evaluated in simulations, T(1)/T(2) phantom acquisition, and in vivo brain acquisitions in 5 healthy subjects with different undersampling factors. Acceleration was also used in vivo to enable acquisitions with higher in‐plane spatial resolution in comparable scan time. RESULTS: Simulations, phantom, and in vivo results show that low rank MRF reconstructions with high acceleration factors (<875 time‐point images, 1 radial spoke per time‐point) have residual aliasing artifacts that propagate into the parametric maps. The artifacts are reduced with the proposed SLLR‐MRF resulting in considerable improvements in precision, without changes in accuracy. In vivo results show improved parametric maps for the proposed SLLR‐MRF, potentially enabling MRF acquisitions with 1 radial spoke per time‐point in approximately 2.6 s (~600 time‐point images) for 2 × 2 mm and 9.6 s (1750 time‐point images) for 1 × 1 mm in‐plane resolution. CONCLUSION: The proposed SLLR‐MRF reconstruction further improves parametric map quality compared with low rank MRF, enabling shorter scan times and/or increased spatial resolution.
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spelling pubmed-64921502019-05-06 Sparsity and locally low rank regularization for MR fingerprinting Lima da Cruz, Gastão Bustin, Aurélien Jaubert, Oliver Schneider, Torben Botnar, René M. Prieto, Claudia Magn Reson Med Full Papers PURPOSE: Develop a sparse and locally low rank (LLR) regularized reconstruction to accelerate MR fingerprinting (MRF). METHODS: Recent works have introduced low rank reconstructions to MRF, based on temporal compression operators learned from the MRF dictionary. In other MR applications, LLR regularization has been introduced to exploit temporal redundancy in local regions of the image. Here, we propose to include spatial sparsity and LLR regularization terms in the MRF reconstruction. This approach, so called SLLR‐MRF, further reduces aliasing in the time‐point images and enables higher acceleration factors. The proposed approach was evaluated in simulations, T(1)/T(2) phantom acquisition, and in vivo brain acquisitions in 5 healthy subjects with different undersampling factors. Acceleration was also used in vivo to enable acquisitions with higher in‐plane spatial resolution in comparable scan time. RESULTS: Simulations, phantom, and in vivo results show that low rank MRF reconstructions with high acceleration factors (<875 time‐point images, 1 radial spoke per time‐point) have residual aliasing artifacts that propagate into the parametric maps. The artifacts are reduced with the proposed SLLR‐MRF resulting in considerable improvements in precision, without changes in accuracy. In vivo results show improved parametric maps for the proposed SLLR‐MRF, potentially enabling MRF acquisitions with 1 radial spoke per time‐point in approximately 2.6 s (~600 time‐point images) for 2 × 2 mm and 9.6 s (1750 time‐point images) for 1 × 1 mm in‐plane resolution. CONCLUSION: The proposed SLLR‐MRF reconstruction further improves parametric map quality compared with low rank MRF, enabling shorter scan times and/or increased spatial resolution. John Wiley and Sons Inc. 2019-02-05 2019-06 /pmc/articles/PMC6492150/ /pubmed/30720209 http://dx.doi.org/10.1002/mrm.27665 Text en © 2019 The Authors Magnetic Resonance in Medicine published by Wiley Periodicals, Inc. on behalf of International Society for Magnetic Resonance in Medicine This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Full Papers
Lima da Cruz, Gastão
Bustin, Aurélien
Jaubert, Oliver
Schneider, Torben
Botnar, René M.
Prieto, Claudia
Sparsity and locally low rank regularization for MR fingerprinting
title Sparsity and locally low rank regularization for MR fingerprinting
title_full Sparsity and locally low rank regularization for MR fingerprinting
title_fullStr Sparsity and locally low rank regularization for MR fingerprinting
title_full_unstemmed Sparsity and locally low rank regularization for MR fingerprinting
title_short Sparsity and locally low rank regularization for MR fingerprinting
title_sort sparsity and locally low rank regularization for mr fingerprinting
topic Full Papers
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6492150/
https://www.ncbi.nlm.nih.gov/pubmed/30720209
http://dx.doi.org/10.1002/mrm.27665
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