Cargando…

A high throughput imaging database of toxicological effects of nanomaterials tested on HepaRG cells

The large amount of existing nanomaterials demands rapid and reliable methods for testing their potential toxicological effect on human health, preferably by means of relevant in vitro techniques in order to reduce testing on animals. Combining high throughput workflows with automated high content i...

Descripción completa

Detalles Bibliográficos
Autores principales: Joossens, Elisabeth, Macko, Peter, Palosaari, Taina, Gerloff, Kirsten, Ojea-Jiménez, Isaac, Gilliland, Douglas, Novak, Jaroslav, Fortaner Torrent, Salvador, Gineste, Jean-Michel, Römer, Isabella, Briffa, Sophie Marie, Valsami-Jones, Eugenia, Lynch, Iseult, Whelan, Maurice
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6497662/
https://www.ncbi.nlm.nih.gov/pubmed/31048742
http://dx.doi.org/10.1038/s41597-019-0053-2
_version_ 1783415504400023552
author Joossens, Elisabeth
Macko, Peter
Palosaari, Taina
Gerloff, Kirsten
Ojea-Jiménez, Isaac
Gilliland, Douglas
Novak, Jaroslav
Fortaner Torrent, Salvador
Gineste, Jean-Michel
Römer, Isabella
Briffa, Sophie Marie
Valsami-Jones, Eugenia
Lynch, Iseult
Whelan, Maurice
author_facet Joossens, Elisabeth
Macko, Peter
Palosaari, Taina
Gerloff, Kirsten
Ojea-Jiménez, Isaac
Gilliland, Douglas
Novak, Jaroslav
Fortaner Torrent, Salvador
Gineste, Jean-Michel
Römer, Isabella
Briffa, Sophie Marie
Valsami-Jones, Eugenia
Lynch, Iseult
Whelan, Maurice
author_sort Joossens, Elisabeth
collection PubMed
description The large amount of existing nanomaterials demands rapid and reliable methods for testing their potential toxicological effect on human health, preferably by means of relevant in vitro techniques in order to reduce testing on animals. Combining high throughput workflows with automated high content imaging techniques allows deriving much more information from cell-based assays than the typical readouts (i.e. one measurement per well) with optical plate-readers. We present here a dataset including data based on a maximum of 14 different read outs (including viable cell count, cell membrane permeability, apoptotic cell death, mitochondrial membrane potential and steatosis) of the human hepatoma HepaRG cell line treated with a large set of nanomaterials, coatings and supernatants at different concentrations. The database, given its size, can be utilized in the development of in silico hazard assessment and prediction tools or can be combined with toxicity results from other in vitro test systems.
format Online
Article
Text
id pubmed-6497662
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-64976622019-05-03 A high throughput imaging database of toxicological effects of nanomaterials tested on HepaRG cells Joossens, Elisabeth Macko, Peter Palosaari, Taina Gerloff, Kirsten Ojea-Jiménez, Isaac Gilliland, Douglas Novak, Jaroslav Fortaner Torrent, Salvador Gineste, Jean-Michel Römer, Isabella Briffa, Sophie Marie Valsami-Jones, Eugenia Lynch, Iseult Whelan, Maurice Sci Data Data Descriptor The large amount of existing nanomaterials demands rapid and reliable methods for testing their potential toxicological effect on human health, preferably by means of relevant in vitro techniques in order to reduce testing on animals. Combining high throughput workflows with automated high content imaging techniques allows deriving much more information from cell-based assays than the typical readouts (i.e. one measurement per well) with optical plate-readers. We present here a dataset including data based on a maximum of 14 different read outs (including viable cell count, cell membrane permeability, apoptotic cell death, mitochondrial membrane potential and steatosis) of the human hepatoma HepaRG cell line treated with a large set of nanomaterials, coatings and supernatants at different concentrations. The database, given its size, can be utilized in the development of in silico hazard assessment and prediction tools or can be combined with toxicity results from other in vitro test systems. Nature Publishing Group UK 2019-05-02 /pmc/articles/PMC6497662/ /pubmed/31048742 http://dx.doi.org/10.1038/s41597-019-0053-2 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files associated with this article.
spellingShingle Data Descriptor
Joossens, Elisabeth
Macko, Peter
Palosaari, Taina
Gerloff, Kirsten
Ojea-Jiménez, Isaac
Gilliland, Douglas
Novak, Jaroslav
Fortaner Torrent, Salvador
Gineste, Jean-Michel
Römer, Isabella
Briffa, Sophie Marie
Valsami-Jones, Eugenia
Lynch, Iseult
Whelan, Maurice
A high throughput imaging database of toxicological effects of nanomaterials tested on HepaRG cells
title A high throughput imaging database of toxicological effects of nanomaterials tested on HepaRG cells
title_full A high throughput imaging database of toxicological effects of nanomaterials tested on HepaRG cells
title_fullStr A high throughput imaging database of toxicological effects of nanomaterials tested on HepaRG cells
title_full_unstemmed A high throughput imaging database of toxicological effects of nanomaterials tested on HepaRG cells
title_short A high throughput imaging database of toxicological effects of nanomaterials tested on HepaRG cells
title_sort high throughput imaging database of toxicological effects of nanomaterials tested on heparg cells
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6497662/
https://www.ncbi.nlm.nih.gov/pubmed/31048742
http://dx.doi.org/10.1038/s41597-019-0053-2
work_keys_str_mv AT joossenselisabeth ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT mackopeter ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT palosaaritaina ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT gerloffkirsten ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT ojeajimenezisaac ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT gillilanddouglas ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT novakjaroslav ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT fortanertorrentsalvador ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT ginestejeanmichel ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT romerisabella ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT briffasophiemarie ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT valsamijoneseugenia ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT lynchiseult ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT whelanmaurice ahighthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT joossenselisabeth highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT mackopeter highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT palosaaritaina highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT gerloffkirsten highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT ojeajimenezisaac highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT gillilanddouglas highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT novakjaroslav highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT fortanertorrentsalvador highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT ginestejeanmichel highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT romerisabella highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT briffasophiemarie highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT valsamijoneseugenia highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT lynchiseult highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells
AT whelanmaurice highthroughputimagingdatabaseoftoxicologicaleffectsofnanomaterialstestedonhepargcells