Complete Genome Sequence of Halomonas olivaria, a Moderately Halophilic Bacterium Isolated from Olive Processing Effluents, Obtained by Nanopore Sequencing

Here, we report the complete genome sequence of Halomonas olivaria strain TYRC17, a moderately halophilic, Gram-negative bacterium that was isolated from olive processing effluents. The 5-Mbp genome consists of 7,375 protein-coding sequences, including a variety of genes involved in tyrosol metaboli...

Descripción completa

Detalles Bibliográficos
Autores principales: Nagata, Shohei, Ii, Konosuke M., Tsukimi, Tomoya, Miura, Masahiro C., Galipon, Josephine, Arakawa, Kazuharu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society for Microbiology 2019
Materias:
Genome Sequences
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6498226/
https://www.ncbi.nlm.nih.gov/pubmed/31048393
http://dx.doi.org/10.1128/MRA.00144-19
_version_ 1783415594165469184
author Nagata, Shohei
Ii, Konosuke M.
Tsukimi, Tomoya
Miura, Masahiro C.
Galipon, Josephine
Arakawa, Kazuharu
author_facet Nagata, Shohei
Ii, Konosuke M.
Tsukimi, Tomoya
Miura, Masahiro C.
Galipon, Josephine
Arakawa, Kazuharu
author_sort Nagata, Shohei
collection PubMed
description Here, we report the complete genome sequence of Halomonas olivaria strain TYRC17, a moderately halophilic, Gram-negative bacterium that was isolated from olive processing effluents. The 5-Mbp genome consists of 7,375 protein-coding sequences, including a variety of genes involved in tyrosol metabolism, nitrate respiration, and the production of polysaccharides.
format Online
Article
Text
id pubmed-6498226
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher American Society for Microbiology
record_format MEDLINE/PubMed
spelling pubmed-64982262019-05-13 Complete Genome Sequence of Halomonas olivaria, a Moderately Halophilic Bacterium Isolated from Olive Processing Effluents, Obtained by Nanopore Sequencing Nagata, Shohei Ii, Konosuke M. Tsukimi, Tomoya Miura, Masahiro C. Galipon, Josephine Arakawa, Kazuharu Microbiol Resour Announc Genome Sequences Here, we report the complete genome sequence of Halomonas olivaria strain TYRC17, a moderately halophilic, Gram-negative bacterium that was isolated from olive processing effluents. The 5-Mbp genome consists of 7,375 protein-coding sequences, including a variety of genes involved in tyrosol metabolism, nitrate respiration, and the production of polysaccharides. American Society for Microbiology 2019-05-02 /pmc/articles/PMC6498226/ /pubmed/31048393 http://dx.doi.org/10.1128/MRA.00144-19 Text en Copyright © 2019 Nagata et al. https://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Genome Sequences
Nagata, Shohei
Ii, Konosuke M.
Tsukimi, Tomoya
Miura, Masahiro C.
Galipon, Josephine
Arakawa, Kazuharu
Complete Genome Sequence of Halomonas olivaria, a Moderately Halophilic Bacterium Isolated from Olive Processing Effluents, Obtained by Nanopore Sequencing
title Complete Genome Sequence of Halomonas olivaria, a Moderately Halophilic Bacterium Isolated from Olive Processing Effluents, Obtained by Nanopore Sequencing
title_full Complete Genome Sequence of Halomonas olivaria, a Moderately Halophilic Bacterium Isolated from Olive Processing Effluents, Obtained by Nanopore Sequencing
title_fullStr Complete Genome Sequence of Halomonas olivaria, a Moderately Halophilic Bacterium Isolated from Olive Processing Effluents, Obtained by Nanopore Sequencing
title_full_unstemmed Complete Genome Sequence of Halomonas olivaria, a Moderately Halophilic Bacterium Isolated from Olive Processing Effluents, Obtained by Nanopore Sequencing
title_short Complete Genome Sequence of Halomonas olivaria, a Moderately Halophilic Bacterium Isolated from Olive Processing Effluents, Obtained by Nanopore Sequencing
title_sort complete genome sequence of halomonas olivaria, a moderately halophilic bacterium isolated from olive processing effluents, obtained by nanopore sequencing
topic Genome Sequences
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6498226/
https://www.ncbi.nlm.nih.gov/pubmed/31048393
http://dx.doi.org/10.1128/MRA.00144-19
work_keys_str_mv AT nagatashohei completegenomesequenceofhalomonasolivariaamoderatelyhalophilicbacteriumisolatedfromoliveprocessingeffluentsobtainedbynanoporesequencing
AT iikonosukem completegenomesequenceofhalomonasolivariaamoderatelyhalophilicbacteriumisolatedfromoliveprocessingeffluentsobtainedbynanoporesequencing
AT tsukimitomoya completegenomesequenceofhalomonasolivariaamoderatelyhalophilicbacteriumisolatedfromoliveprocessingeffluentsobtainedbynanoporesequencing
AT miuramasahiroc completegenomesequenceofhalomonasolivariaamoderatelyhalophilicbacteriumisolatedfromoliveprocessingeffluentsobtainedbynanoporesequencing
AT galiponjosephine completegenomesequenceofhalomonasolivariaamoderatelyhalophilicbacteriumisolatedfromoliveprocessingeffluentsobtainedbynanoporesequencing
AT arakawakazuharu completegenomesequenceofhalomonasolivariaamoderatelyhalophilicbacteriumisolatedfromoliveprocessingeffluentsobtainedbynanoporesequencing

Ejemplares similares