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Prevalence of pathogenic Escherichia coli from salad vegetable and fruits sold in Jakarta
OBJECTIVE: Escherichia coli is a normal inhabitant of mammalian’s gut, but some strains acquired virulence factor and became pathogenic. Enterotoxigenic E. coli (ETEC), enterohemorrhagic E. coli (EHEC), enteropathogenic E. coli (EPEC), enteroinvasive E. coli (EIEC), and enteroaggregative E. coli (EA...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6498633/ https://www.ncbi.nlm.nih.gov/pubmed/31046825 http://dx.doi.org/10.1186/s13104-019-4284-2 |
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author | Waturangi, Diana E. Hudiono, Fredy Aliwarga, Edita |
author_facet | Waturangi, Diana E. Hudiono, Fredy Aliwarga, Edita |
author_sort | Waturangi, Diana E. |
collection | PubMed |
description | OBJECTIVE: Escherichia coli is a normal inhabitant of mammalian’s gut, but some strains acquired virulence factor and became pathogenic. Enterotoxigenic E. coli (ETEC), enterohemorrhagic E. coli (EHEC), enteropathogenic E. coli (EPEC), enteroinvasive E. coli (EIEC), and enteroaggregative E. coli (EAEC) are among pathogenic strains of E. coli. Vegetables and fruits could be sources of transmission. Samples were collected and subjected to three-tubes Most Probable Number (MPN) analysis followed by Multiplex PCR. Six sets of primer encoding virulence genes were used: stx, ipah, aggr, eae, elt and est. RESULTS: From this study we found, the highest maximum number for the MPN result reached > 1100 MPN/mL and the lowest is 3 MPN/mL. From first multiplex PCR showed 65 salad vegetable samples, 7.69% were positive and from the 63 fruit samples, 11.11% were positive. From second multiplex PCR for 76 isolates, 55 (72.37%) isolates were aggR positive (EAEC), 12 (15.79%) isolates were eae positive (EPEC), and 9 (11.84%) were elt positive (ETEC). Antimicrobial resistance assay showed that 83.33% of the isolates were multi resistant. Resistances are observed to 10 μg Ampicillin (22.22%), 5 μg Ciprofloxacin (11.11%), 10 μg Gentamycin (33.33%), 30 μg Kanamycin (38.89%), 10 μg Streptomycin (55.56%), 5 μg Trimethoprim (16.67%), and 300 U Polymyxin B (61.11%). |
format | Online Article Text |
id | pubmed-6498633 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-64986332019-05-09 Prevalence of pathogenic Escherichia coli from salad vegetable and fruits sold in Jakarta Waturangi, Diana E. Hudiono, Fredy Aliwarga, Edita BMC Res Notes Research Note OBJECTIVE: Escherichia coli is a normal inhabitant of mammalian’s gut, but some strains acquired virulence factor and became pathogenic. Enterotoxigenic E. coli (ETEC), enterohemorrhagic E. coli (EHEC), enteropathogenic E. coli (EPEC), enteroinvasive E. coli (EIEC), and enteroaggregative E. coli (EAEC) are among pathogenic strains of E. coli. Vegetables and fruits could be sources of transmission. Samples were collected and subjected to three-tubes Most Probable Number (MPN) analysis followed by Multiplex PCR. Six sets of primer encoding virulence genes were used: stx, ipah, aggr, eae, elt and est. RESULTS: From this study we found, the highest maximum number for the MPN result reached > 1100 MPN/mL and the lowest is 3 MPN/mL. From first multiplex PCR showed 65 salad vegetable samples, 7.69% were positive and from the 63 fruit samples, 11.11% were positive. From second multiplex PCR for 76 isolates, 55 (72.37%) isolates were aggR positive (EAEC), 12 (15.79%) isolates were eae positive (EPEC), and 9 (11.84%) were elt positive (ETEC). Antimicrobial resistance assay showed that 83.33% of the isolates were multi resistant. Resistances are observed to 10 μg Ampicillin (22.22%), 5 μg Ciprofloxacin (11.11%), 10 μg Gentamycin (33.33%), 30 μg Kanamycin (38.89%), 10 μg Streptomycin (55.56%), 5 μg Trimethoprim (16.67%), and 300 U Polymyxin B (61.11%). BioMed Central 2019-05-02 /pmc/articles/PMC6498633/ /pubmed/31046825 http://dx.doi.org/10.1186/s13104-019-4284-2 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Note Waturangi, Diana E. Hudiono, Fredy Aliwarga, Edita Prevalence of pathogenic Escherichia coli from salad vegetable and fruits sold in Jakarta |
title | Prevalence of pathogenic Escherichia coli from salad vegetable and fruits sold in Jakarta |
title_full | Prevalence of pathogenic Escherichia coli from salad vegetable and fruits sold in Jakarta |
title_fullStr | Prevalence of pathogenic Escherichia coli from salad vegetable and fruits sold in Jakarta |
title_full_unstemmed | Prevalence of pathogenic Escherichia coli from salad vegetable and fruits sold in Jakarta |
title_short | Prevalence of pathogenic Escherichia coli from salad vegetable and fruits sold in Jakarta |
title_sort | prevalence of pathogenic escherichia coli from salad vegetable and fruits sold in jakarta |
topic | Research Note |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6498633/ https://www.ncbi.nlm.nih.gov/pubmed/31046825 http://dx.doi.org/10.1186/s13104-019-4284-2 |
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