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Genetic variants of calcium sensing receptor gene and risk of colorectal cancer: A case-control study

OBJECTIVES: To determine the role of two genetic variants, (rs3804594) and (rs1801725), in calcium sensing receptor (CASR) gene with colorectal cancer (CRC) risk in patients visited King Abdulaziz University hospital (KAUH) in Jeddah, Saudi Arabia. METHODS: Genomic DNA was extracted, by commercial D...

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Autor principal: Al-Ghafari, Ayat Badr
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Professional Medical Publications 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6500844/
https://www.ncbi.nlm.nih.gov/pubmed/31086531
http://dx.doi.org/10.12669/pjms.35.2.38
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author Al-Ghafari, Ayat Badr
author_facet Al-Ghafari, Ayat Badr
author_sort Al-Ghafari, Ayat Badr
collection PubMed
description OBJECTIVES: To determine the role of two genetic variants, (rs3804594) and (rs1801725), in calcium sensing receptor (CASR) gene with colorectal cancer (CRC) risk in patients visited King Abdulaziz University hospital (KAUH) in Jeddah, Saudi Arabia. METHODS: Genomic DNA was extracted, by commercial DNA extraction kit, from whole blood of 100 CRC patients and 124 controls who visited KAUH from January 2016 to September 2016. Then genotype and allele distributions of both variants were determined by PCR-RFLP and DNA sequencing techniques. All statistical analyses were performed by unpaired t-test and P-values <0.05 were considered statistically significant. RESULTS: Data obtained from χ(2) test showed that intron 4 variant in CASR gene was distributed 100% normally in the 224 participants, however, exon 7 variant showed 100% homozygous distribution in the controls; whereas, in CRC patients it was distributed equally into 50% heterozygous and 50% homozygous with no detection for wild type. CONCLUSION: Intron 4 variant (rs3804594) in CASR gene is not correlated to CRC risk. However, more investigations are needed to elucidate the role of CASR gene exon 7 (rs1801725) variant in CRC development as the current results are not definitive.
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spelling pubmed-65008442019-05-13 Genetic variants of calcium sensing receptor gene and risk of colorectal cancer: A case-control study Al-Ghafari, Ayat Badr Pak J Med Sci Original Article OBJECTIVES: To determine the role of two genetic variants, (rs3804594) and (rs1801725), in calcium sensing receptor (CASR) gene with colorectal cancer (CRC) risk in patients visited King Abdulaziz University hospital (KAUH) in Jeddah, Saudi Arabia. METHODS: Genomic DNA was extracted, by commercial DNA extraction kit, from whole blood of 100 CRC patients and 124 controls who visited KAUH from January 2016 to September 2016. Then genotype and allele distributions of both variants were determined by PCR-RFLP and DNA sequencing techniques. All statistical analyses were performed by unpaired t-test and P-values <0.05 were considered statistically significant. RESULTS: Data obtained from χ(2) test showed that intron 4 variant in CASR gene was distributed 100% normally in the 224 participants, however, exon 7 variant showed 100% homozygous distribution in the controls; whereas, in CRC patients it was distributed equally into 50% heterozygous and 50% homozygous with no detection for wild type. CONCLUSION: Intron 4 variant (rs3804594) in CASR gene is not correlated to CRC risk. However, more investigations are needed to elucidate the role of CASR gene exon 7 (rs1801725) variant in CRC development as the current results are not definitive. Professional Medical Publications 2019 /pmc/articles/PMC6500844/ /pubmed/31086531 http://dx.doi.org/10.12669/pjms.35.2.38 Text en Copyright: © Pakistan Journal of Medical Sciences http://creativecommons.org/licenses/by/3.0 This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Article
Al-Ghafari, Ayat Badr
Genetic variants of calcium sensing receptor gene and risk of colorectal cancer: A case-control study
title Genetic variants of calcium sensing receptor gene and risk of colorectal cancer: A case-control study
title_full Genetic variants of calcium sensing receptor gene and risk of colorectal cancer: A case-control study
title_fullStr Genetic variants of calcium sensing receptor gene and risk of colorectal cancer: A case-control study
title_full_unstemmed Genetic variants of calcium sensing receptor gene and risk of colorectal cancer: A case-control study
title_short Genetic variants of calcium sensing receptor gene and risk of colorectal cancer: A case-control study
title_sort genetic variants of calcium sensing receptor gene and risk of colorectal cancer: a case-control study
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6500844/
https://www.ncbi.nlm.nih.gov/pubmed/31086531
http://dx.doi.org/10.12669/pjms.35.2.38
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