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Genetic variation and forensic efficiency of 30 indels for three ethnic groups in Guangxi: relationships with other populations
AIM: In this study, we used a series of diallelic genetic marker insertion/deletion polymorphism (indel) to investigate three populations of Yao, Kelao, and Zhuang groups in the Guangxi region of China and to evaluate their efficiency in forensic application. RESULT: No deviations for all 30 loci we...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6501771/ https://www.ncbi.nlm.nih.gov/pubmed/31110924 http://dx.doi.org/10.7717/peerj.6861 |
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author | Du, Weian Feng, Chunlei Yao, Ting Xiao, Cheng Huang, Hongyan Wu, Weibin Zhu, Linnan Qiao, Honghua Liu, Chao Chen, Ling |
author_facet | Du, Weian Feng, Chunlei Yao, Ting Xiao, Cheng Huang, Hongyan Wu, Weibin Zhu, Linnan Qiao, Honghua Liu, Chao Chen, Ling |
author_sort | Du, Weian |
collection | PubMed |
description | AIM: In this study, we used a series of diallelic genetic marker insertion/deletion polymorphism (indel) to investigate three populations of Yao, Kelao, and Zhuang groups in the Guangxi region of China and to evaluate their efficiency in forensic application. RESULT: No deviations for all 30 loci were observed from the Hardy–Weinberg equilibrium after Bonferroni correction (p > 0.05/30 = 0.0017). The allele frequencies of the short allele (DIP-) for the above three populations were in the range of 0.0520–0.9480, 0.0950–0.8780, and 0.0850–0.915, respectively. The observed heterozygosity of the 30 loci for the three populations was in the ranges 0.0802–0.5802, 0.1908–0.6053, and 0.1400–0.5600, respectively. The cumulative power of exclusion and combined discrimination power for Yao, Kelao, and Zhuang groups were (0.9843 and 0.9999999999433), (0.9972 and 0.9999999999184), and (0.9845 and 0.9999999999608), respectively. The DA distance, principal component analysis, and cluster analysis indicated a clear regional distribution. In addition, Zhuang groups had close genetic relationships with the Yao and Kelao populations in the Guangxi region. CONCLUSION: This study indicated that the 30 loci were qualified for personal identification; moreover, they could be used as complementary genetic markers for paternity testing in forensic cases for the studied populations. |
format | Online Article Text |
id | pubmed-6501771 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-65017712019-05-20 Genetic variation and forensic efficiency of 30 indels for three ethnic groups in Guangxi: relationships with other populations Du, Weian Feng, Chunlei Yao, Ting Xiao, Cheng Huang, Hongyan Wu, Weibin Zhu, Linnan Qiao, Honghua Liu, Chao Chen, Ling PeerJ Genetics AIM: In this study, we used a series of diallelic genetic marker insertion/deletion polymorphism (indel) to investigate three populations of Yao, Kelao, and Zhuang groups in the Guangxi region of China and to evaluate their efficiency in forensic application. RESULT: No deviations for all 30 loci were observed from the Hardy–Weinberg equilibrium after Bonferroni correction (p > 0.05/30 = 0.0017). The allele frequencies of the short allele (DIP-) for the above three populations were in the range of 0.0520–0.9480, 0.0950–0.8780, and 0.0850–0.915, respectively. The observed heterozygosity of the 30 loci for the three populations was in the ranges 0.0802–0.5802, 0.1908–0.6053, and 0.1400–0.5600, respectively. The cumulative power of exclusion and combined discrimination power for Yao, Kelao, and Zhuang groups were (0.9843 and 0.9999999999433), (0.9972 and 0.9999999999184), and (0.9845 and 0.9999999999608), respectively. The DA distance, principal component analysis, and cluster analysis indicated a clear regional distribution. In addition, Zhuang groups had close genetic relationships with the Yao and Kelao populations in the Guangxi region. CONCLUSION: This study indicated that the 30 loci were qualified for personal identification; moreover, they could be used as complementary genetic markers for paternity testing in forensic cases for the studied populations. PeerJ Inc. 2019-05-03 /pmc/articles/PMC6501771/ /pubmed/31110924 http://dx.doi.org/10.7717/peerj.6861 Text en © 2019 Du et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Genetics Du, Weian Feng, Chunlei Yao, Ting Xiao, Cheng Huang, Hongyan Wu, Weibin Zhu, Linnan Qiao, Honghua Liu, Chao Chen, Ling Genetic variation and forensic efficiency of 30 indels for three ethnic groups in Guangxi: relationships with other populations |
title | Genetic variation and forensic efficiency of 30 indels for three ethnic groups in Guangxi: relationships with other populations |
title_full | Genetic variation and forensic efficiency of 30 indels for three ethnic groups in Guangxi: relationships with other populations |
title_fullStr | Genetic variation and forensic efficiency of 30 indels for three ethnic groups in Guangxi: relationships with other populations |
title_full_unstemmed | Genetic variation and forensic efficiency of 30 indels for three ethnic groups in Guangxi: relationships with other populations |
title_short | Genetic variation and forensic efficiency of 30 indels for three ethnic groups in Guangxi: relationships with other populations |
title_sort | genetic variation and forensic efficiency of 30 indels for three ethnic groups in guangxi: relationships with other populations |
topic | Genetics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6501771/ https://www.ncbi.nlm.nih.gov/pubmed/31110924 http://dx.doi.org/10.7717/peerj.6861 |
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