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Combining UAV-based hyperspectral imagery and machine learning algorithms for soil moisture content monitoring

Soil moisture content (SMC) is an important factor that affects agricultural development in arid regions. Compared with the space-borne remote sensing system, the unmanned aerial vehicle (UAV) has been widely used because of its stronger controllability and higher resolution. It also provides a more...

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Autores principales: Ge, Xiangyu, Wang, Jingzhe, Ding, Jianli, Cao, Xiaoyi, Zhang, Zipeng, Liu, Jie, Li, Xiaohang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6501779/
https://www.ncbi.nlm.nih.gov/pubmed/31110930
http://dx.doi.org/10.7717/peerj.6926
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author Ge, Xiangyu
Wang, Jingzhe
Ding, Jianli
Cao, Xiaoyi
Zhang, Zipeng
Liu, Jie
Li, Xiaohang
author_facet Ge, Xiangyu
Wang, Jingzhe
Ding, Jianli
Cao, Xiaoyi
Zhang, Zipeng
Liu, Jie
Li, Xiaohang
author_sort Ge, Xiangyu
collection PubMed
description Soil moisture content (SMC) is an important factor that affects agricultural development in arid regions. Compared with the space-borne remote sensing system, the unmanned aerial vehicle (UAV) has been widely used because of its stronger controllability and higher resolution. It also provides a more convenient method for monitoring SMC than normal measurement methods that includes field sampling and oven-drying techniques. However, research based on UAV hyperspectral data has not yet formed a standard procedure in arid regions. Therefore, a universal processing scheme is required. We hypothesized that combining pretreatments of UAV hyperspectral imagery under optimal indices and a set of field observations within a machine learning framework will yield a highly accurate estimate of SMC. Optimal 2D spectral indices act as indispensable variables and allow us to characterize a model’s SMC performance and spatial distribution. For this purpose, we used hyperspectral imagery and a total of 70 topsoil samples (0–10 cm) from the farmland (2.5 × 10(4) m(2)) of Fukang City, Xinjiang Uygur AutonomousRegion, China. The random forest (RF) method and extreme learning machine (ELM) were used to estimate the SMC using six methods of pretreatments combined with four optimal spectral indices. The validation accuracy of the estimated method clearly increased compared with that of linear models. The combination of pretreatments and indices by our assessment effectively eliminated the interference and the noises. Comparing two machine learning algorithms showed that the RF models were superior to the ELM models, and the best model was PIR (R(2)(val) = 0.907, RMSEP = 1.477, and RPD = 3.396). The SMC map predicted via the best scheme was highly similar to the SMC map measured. We conclude that combining preprocessed spectral indices and machine learning algorithms allows estimation of SMC with high accuracy (R(2)(val) = 0.907) via UAV hyperspectral imagery on a regional scale. Ultimately, our program might improve management and conservation strategies for agroecosystem systems in arid regions.
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spelling pubmed-65017792019-05-20 Combining UAV-based hyperspectral imagery and machine learning algorithms for soil moisture content monitoring Ge, Xiangyu Wang, Jingzhe Ding, Jianli Cao, Xiaoyi Zhang, Zipeng Liu, Jie Li, Xiaohang PeerJ Ecosystem Science Soil moisture content (SMC) is an important factor that affects agricultural development in arid regions. Compared with the space-borne remote sensing system, the unmanned aerial vehicle (UAV) has been widely used because of its stronger controllability and higher resolution. It also provides a more convenient method for monitoring SMC than normal measurement methods that includes field sampling and oven-drying techniques. However, research based on UAV hyperspectral data has not yet formed a standard procedure in arid regions. Therefore, a universal processing scheme is required. We hypothesized that combining pretreatments of UAV hyperspectral imagery under optimal indices and a set of field observations within a machine learning framework will yield a highly accurate estimate of SMC. Optimal 2D spectral indices act as indispensable variables and allow us to characterize a model’s SMC performance and spatial distribution. For this purpose, we used hyperspectral imagery and a total of 70 topsoil samples (0–10 cm) from the farmland (2.5 × 10(4) m(2)) of Fukang City, Xinjiang Uygur AutonomousRegion, China. The random forest (RF) method and extreme learning machine (ELM) were used to estimate the SMC using six methods of pretreatments combined with four optimal spectral indices. The validation accuracy of the estimated method clearly increased compared with that of linear models. The combination of pretreatments and indices by our assessment effectively eliminated the interference and the noises. Comparing two machine learning algorithms showed that the RF models were superior to the ELM models, and the best model was PIR (R(2)(val) = 0.907, RMSEP = 1.477, and RPD = 3.396). The SMC map predicted via the best scheme was highly similar to the SMC map measured. We conclude that combining preprocessed spectral indices and machine learning algorithms allows estimation of SMC with high accuracy (R(2)(val) = 0.907) via UAV hyperspectral imagery on a regional scale. Ultimately, our program might improve management and conservation strategies for agroecosystem systems in arid regions. PeerJ Inc. 2019-05-03 /pmc/articles/PMC6501779/ /pubmed/31110930 http://dx.doi.org/10.7717/peerj.6926 Text en © 2019 Ge et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Ecosystem Science
Ge, Xiangyu
Wang, Jingzhe
Ding, Jianli
Cao, Xiaoyi
Zhang, Zipeng
Liu, Jie
Li, Xiaohang
Combining UAV-based hyperspectral imagery and machine learning algorithms for soil moisture content monitoring
title Combining UAV-based hyperspectral imagery and machine learning algorithms for soil moisture content monitoring
title_full Combining UAV-based hyperspectral imagery and machine learning algorithms for soil moisture content monitoring
title_fullStr Combining UAV-based hyperspectral imagery and machine learning algorithms for soil moisture content monitoring
title_full_unstemmed Combining UAV-based hyperspectral imagery and machine learning algorithms for soil moisture content monitoring
title_short Combining UAV-based hyperspectral imagery and machine learning algorithms for soil moisture content monitoring
title_sort combining uav-based hyperspectral imagery and machine learning algorithms for soil moisture content monitoring
topic Ecosystem Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6501779/
https://www.ncbi.nlm.nih.gov/pubmed/31110930
http://dx.doi.org/10.7717/peerj.6926
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