Cargando…
Analytical Py-GC/MS of Genetically Modified Poplar for the Increased Production of Bio-aromatics
Genetic engineering is a powerful tool to steer bio-oil composition towards the production of speciality chemicals such as guaiacols, syringols, phenols, and vanillin through well-defined biomass feedstocks. Our previous work demonstrated the effects of lignin biosynthesis gene modification on the p...
Autores principales: | , , , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Research Network of Computational and Structural Biotechnology
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6502739/ https://www.ncbi.nlm.nih.gov/pubmed/31080566 http://dx.doi.org/10.1016/j.csbj.2019.04.007 |
_version_ | 1783416276708753408 |
---|---|
author | SriBala, Gorugantu Toraman, Hilal Ezgi Symoens, Steffen Déjardin, Annabelle Pilate, Gilles Boerjan, Wout Ronsse, Frederik Van Geem, Kevin M. Marin, Guy B. |
author_facet | SriBala, Gorugantu Toraman, Hilal Ezgi Symoens, Steffen Déjardin, Annabelle Pilate, Gilles Boerjan, Wout Ronsse, Frederik Van Geem, Kevin M. Marin, Guy B. |
author_sort | SriBala, Gorugantu |
collection | PubMed |
description | Genetic engineering is a powerful tool to steer bio-oil composition towards the production of speciality chemicals such as guaiacols, syringols, phenols, and vanillin through well-defined biomass feedstocks. Our previous work demonstrated the effects of lignin biosynthesis gene modification on the pyrolysis vapour compositions obtained from wood derived from greenhouse-grown poplars. In this study, field-grown poplars downregulated in the genes encoding CINNAMYL ALCOHOL DEHYDROGENASE (CAD), CAFFEIC ACID O-METHYLTRANSFERASE (COMT) and CAFFEOYL-CoA O-METHYLTRANSFERASE (CCoAOMT), and their corresponding wild type were pyrolysed in a Py-GC/MS. This work aims at capturing the effects of downregulation of the three enzymes on bio-oil composition using principal component analysis (PCA). 3,5-methoxytoluene, vanillin, coniferyl alcohol, 4-vinyl guaiacol, syringol, syringaldehyde, and guaiacol are the determining factors in the PCA analysis that are the substantially affected by COMT, CAD and CCoAOMT enzyme downregulation. COMT and CAD downregulated transgenic lines proved to be statistically different from the wild type because of a substantial difference in S and G lignin units. The sCAD line lead to a significant drop (nearly 51%) in S-lignin derived compounds, while CCoAOMT downregulation affected the least (7–11%). Further, removal of extractives via pretreatment enhanced the statistical differences among the CAD transgenic lines and its wild type. On the other hand, COMT downregulation caused 2-fold reduction in S-derived compounds compared to G-derived compounds. This study manifests the applicability of PCA analysis in tracking the biological changes in biomass (poplar in this case) and their effects on pyrolysis-oil compositions. |
format | Online Article Text |
id | pubmed-6502739 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Research Network of Computational and Structural Biotechnology |
record_format | MEDLINE/PubMed |
spelling | pubmed-65027392019-05-10 Analytical Py-GC/MS of Genetically Modified Poplar for the Increased Production of Bio-aromatics SriBala, Gorugantu Toraman, Hilal Ezgi Symoens, Steffen Déjardin, Annabelle Pilate, Gilles Boerjan, Wout Ronsse, Frederik Van Geem, Kevin M. Marin, Guy B. Comput Struct Biotechnol J Research Article Genetic engineering is a powerful tool to steer bio-oil composition towards the production of speciality chemicals such as guaiacols, syringols, phenols, and vanillin through well-defined biomass feedstocks. Our previous work demonstrated the effects of lignin biosynthesis gene modification on the pyrolysis vapour compositions obtained from wood derived from greenhouse-grown poplars. In this study, field-grown poplars downregulated in the genes encoding CINNAMYL ALCOHOL DEHYDROGENASE (CAD), CAFFEIC ACID O-METHYLTRANSFERASE (COMT) and CAFFEOYL-CoA O-METHYLTRANSFERASE (CCoAOMT), and their corresponding wild type were pyrolysed in a Py-GC/MS. This work aims at capturing the effects of downregulation of the three enzymes on bio-oil composition using principal component analysis (PCA). 3,5-methoxytoluene, vanillin, coniferyl alcohol, 4-vinyl guaiacol, syringol, syringaldehyde, and guaiacol are the determining factors in the PCA analysis that are the substantially affected by COMT, CAD and CCoAOMT enzyme downregulation. COMT and CAD downregulated transgenic lines proved to be statistically different from the wild type because of a substantial difference in S and G lignin units. The sCAD line lead to a significant drop (nearly 51%) in S-lignin derived compounds, while CCoAOMT downregulation affected the least (7–11%). Further, removal of extractives via pretreatment enhanced the statistical differences among the CAD transgenic lines and its wild type. On the other hand, COMT downregulation caused 2-fold reduction in S-derived compounds compared to G-derived compounds. This study manifests the applicability of PCA analysis in tracking the biological changes in biomass (poplar in this case) and their effects on pyrolysis-oil compositions. Research Network of Computational and Structural Biotechnology 2019-04-25 /pmc/articles/PMC6502739/ /pubmed/31080566 http://dx.doi.org/10.1016/j.csbj.2019.04.007 Text en © 2019 The Authors http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article SriBala, Gorugantu Toraman, Hilal Ezgi Symoens, Steffen Déjardin, Annabelle Pilate, Gilles Boerjan, Wout Ronsse, Frederik Van Geem, Kevin M. Marin, Guy B. Analytical Py-GC/MS of Genetically Modified Poplar for the Increased Production of Bio-aromatics |
title | Analytical Py-GC/MS of Genetically Modified Poplar for the Increased Production of Bio-aromatics |
title_full | Analytical Py-GC/MS of Genetically Modified Poplar for the Increased Production of Bio-aromatics |
title_fullStr | Analytical Py-GC/MS of Genetically Modified Poplar for the Increased Production of Bio-aromatics |
title_full_unstemmed | Analytical Py-GC/MS of Genetically Modified Poplar for the Increased Production of Bio-aromatics |
title_short | Analytical Py-GC/MS of Genetically Modified Poplar for the Increased Production of Bio-aromatics |
title_sort | analytical py-gc/ms of genetically modified poplar for the increased production of bio-aromatics |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6502739/ https://www.ncbi.nlm.nih.gov/pubmed/31080566 http://dx.doi.org/10.1016/j.csbj.2019.04.007 |
work_keys_str_mv | AT sribalagorugantu analyticalpygcmsofgeneticallymodifiedpoplarfortheincreasedproductionofbioaromatics AT toramanhilalezgi analyticalpygcmsofgeneticallymodifiedpoplarfortheincreasedproductionofbioaromatics AT symoenssteffen analyticalpygcmsofgeneticallymodifiedpoplarfortheincreasedproductionofbioaromatics AT dejardinannabelle analyticalpygcmsofgeneticallymodifiedpoplarfortheincreasedproductionofbioaromatics AT pilategilles analyticalpygcmsofgeneticallymodifiedpoplarfortheincreasedproductionofbioaromatics AT boerjanwout analyticalpygcmsofgeneticallymodifiedpoplarfortheincreasedproductionofbioaromatics AT ronssefrederik analyticalpygcmsofgeneticallymodifiedpoplarfortheincreasedproductionofbioaromatics AT vangeemkevinm analyticalpygcmsofgeneticallymodifiedpoplarfortheincreasedproductionofbioaromatics AT maringuyb analyticalpygcmsofgeneticallymodifiedpoplarfortheincreasedproductionofbioaromatics |