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Deep learning-based survival prediction of oral cancer patients
The Cox proportional hazards model commonly used to evaluate prognostic variables in survival of cancer patients may be too simplistic to properly predict a cancer patient’s outcome since it assumes that the outcome is a linear combination of covariates. In this retrospective study including 255 pat...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6502856/ https://www.ncbi.nlm.nih.gov/pubmed/31061433 http://dx.doi.org/10.1038/s41598-019-43372-7 |
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author | Kim, Dong Wook Lee, Sanghoon Kwon, Sunmo Nam, Woong Cha, In-Ho Kim, Hyung Jun |
author_facet | Kim, Dong Wook Lee, Sanghoon Kwon, Sunmo Nam, Woong Cha, In-Ho Kim, Hyung Jun |
author_sort | Kim, Dong Wook |
collection | PubMed |
description | The Cox proportional hazards model commonly used to evaluate prognostic variables in survival of cancer patients may be too simplistic to properly predict a cancer patient’s outcome since it assumes that the outcome is a linear combination of covariates. In this retrospective study including 255 patients suitable for analysis who underwent surgical treatment in our department from 2000 to 2017, we applied a deep learning-based survival prediction method in oral squamous cell carcinoma (SCC) patients and validated its performance. Survival prediction using DeepSurv, a deep learning based-survival prediction algorithm, was compared with random survival forest (RSF) and the Cox proportional hazard model (CPH). DeepSurv showed the best performance among the three models, the c-index of the training and testing sets reaching 0.810 and 0.781, respectively, followed by RSF (0.770/0.764), and CPH (0.756/0.694). The performance of DeepSurv steadily improved with added features. Thus, deep learning-based survival prediction may improve prediction accuracy and guide clinicians both in choosing treatment options for better survival and in avoiding unnecessary treatments. |
format | Online Article Text |
id | pubmed-6502856 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-65028562019-05-20 Deep learning-based survival prediction of oral cancer patients Kim, Dong Wook Lee, Sanghoon Kwon, Sunmo Nam, Woong Cha, In-Ho Kim, Hyung Jun Sci Rep Article The Cox proportional hazards model commonly used to evaluate prognostic variables in survival of cancer patients may be too simplistic to properly predict a cancer patient’s outcome since it assumes that the outcome is a linear combination of covariates. In this retrospective study including 255 patients suitable for analysis who underwent surgical treatment in our department from 2000 to 2017, we applied a deep learning-based survival prediction method in oral squamous cell carcinoma (SCC) patients and validated its performance. Survival prediction using DeepSurv, a deep learning based-survival prediction algorithm, was compared with random survival forest (RSF) and the Cox proportional hazard model (CPH). DeepSurv showed the best performance among the three models, the c-index of the training and testing sets reaching 0.810 and 0.781, respectively, followed by RSF (0.770/0.764), and CPH (0.756/0.694). The performance of DeepSurv steadily improved with added features. Thus, deep learning-based survival prediction may improve prediction accuracy and guide clinicians both in choosing treatment options for better survival and in avoiding unnecessary treatments. Nature Publishing Group UK 2019-05-06 /pmc/articles/PMC6502856/ /pubmed/31061433 http://dx.doi.org/10.1038/s41598-019-43372-7 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Kim, Dong Wook Lee, Sanghoon Kwon, Sunmo Nam, Woong Cha, In-Ho Kim, Hyung Jun Deep learning-based survival prediction of oral cancer patients |
title | Deep learning-based survival prediction of oral cancer patients |
title_full | Deep learning-based survival prediction of oral cancer patients |
title_fullStr | Deep learning-based survival prediction of oral cancer patients |
title_full_unstemmed | Deep learning-based survival prediction of oral cancer patients |
title_short | Deep learning-based survival prediction of oral cancer patients |
title_sort | deep learning-based survival prediction of oral cancer patients |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6502856/ https://www.ncbi.nlm.nih.gov/pubmed/31061433 http://dx.doi.org/10.1038/s41598-019-43372-7 |
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