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Constant Communities in Complex Networks
Identifying community structure is a fundamental problem in network analysis. Most community detection algorithms are based on optimizing a combinatorial parameter, for example modularity. This optimization is generally NP-hard, thus merely changing the vertex order can alter their assignments to th...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2013
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6504828/ https://www.ncbi.nlm.nih.gov/pubmed/23661107 http://dx.doi.org/10.1038/srep01825 |
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author | Chakraborty, Tanmoy Srinivasan, Sriram Ganguly, Niloy Bhowmick, Sanjukta Mukherjee, Animesh |
author_facet | Chakraborty, Tanmoy Srinivasan, Sriram Ganguly, Niloy Bhowmick, Sanjukta Mukherjee, Animesh |
author_sort | Chakraborty, Tanmoy |
collection | PubMed |
description | Identifying community structure is a fundamental problem in network analysis. Most community detection algorithms are based on optimizing a combinatorial parameter, for example modularity. This optimization is generally NP-hard, thus merely changing the vertex order can alter their assignments to the community. However, there has been less study on how vertex ordering influences the results of the community detection algorithms. Here we identify and study the properties of invariant groups of vertices (constant communities) whose assignment to communities are, quite remarkably, not affected by vertex ordering. The percentage of constant communities can vary across different applications and based on empirical results we propose metrics to evaluate these communities. Using constant communities as a pre-processing step, one can significantly reduce the variation of the results. Finally, we present a case study on phoneme network and illustrate that constant communities, quite strikingly, form the core functional units of the larger communities. |
format | Online Article Text |
id | pubmed-6504828 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2013 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-65048282019-05-21 Constant Communities in Complex Networks Chakraborty, Tanmoy Srinivasan, Sriram Ganguly, Niloy Bhowmick, Sanjukta Mukherjee, Animesh Sci Rep Article Identifying community structure is a fundamental problem in network analysis. Most community detection algorithms are based on optimizing a combinatorial parameter, for example modularity. This optimization is generally NP-hard, thus merely changing the vertex order can alter their assignments to the community. However, there has been less study on how vertex ordering influences the results of the community detection algorithms. Here we identify and study the properties of invariant groups of vertices (constant communities) whose assignment to communities are, quite remarkably, not affected by vertex ordering. The percentage of constant communities can vary across different applications and based on empirical results we propose metrics to evaluate these communities. Using constant communities as a pre-processing step, one can significantly reduce the variation of the results. Finally, we present a case study on phoneme network and illustrate that constant communities, quite strikingly, form the core functional units of the larger communities. Nature Publishing Group 2013-05-10 /pmc/articles/PMC6504828/ /pubmed/23661107 http://dx.doi.org/10.1038/srep01825 Text en Copyright © 2013, Macmillan Publishers Limited. All rights reserved http://creativecommons.org/licenses/by-nc-nd/3.0/ This work is licensed under a Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported License. To view a copy of this license, visit http://creativecommons.org/licenses/by-nc-nd/3.0/ |
spellingShingle | Article Chakraborty, Tanmoy Srinivasan, Sriram Ganguly, Niloy Bhowmick, Sanjukta Mukherjee, Animesh Constant Communities in Complex Networks |
title | Constant Communities in Complex Networks |
title_full | Constant Communities in Complex Networks |
title_fullStr | Constant Communities in Complex Networks |
title_full_unstemmed | Constant Communities in Complex Networks |
title_short | Constant Communities in Complex Networks |
title_sort | constant communities in complex networks |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6504828/ https://www.ncbi.nlm.nih.gov/pubmed/23661107 http://dx.doi.org/10.1038/srep01825 |
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