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Comparison of the C—H⋯O bonding in two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide
The crystal structures of two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide, C(4)H(8)O(4)S(2), have been determined in order to examine the nature of possible intermolecular hydrogen bonds. Phase 1 is monoclinic, space group C2/m, with unit-cell dimensions of a = 9.073 (8), b = 7.077 (6),...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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International Union of Crystallography
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6505583/ https://www.ncbi.nlm.nih.gov/pubmed/31110789 http://dx.doi.org/10.1107/S2056989019004407 |
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author | Harlow, Richard L. Oliver, Allen G. Baker, Jonathan M. Marshall, William J. Sammes, Michael P. |
author_facet | Harlow, Richard L. Oliver, Allen G. Baker, Jonathan M. Marshall, William J. Sammes, Michael P. |
author_sort | Harlow, Richard L. |
collection | PubMed |
description | The crystal structures of two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide, C(4)H(8)O(4)S(2), have been determined in order to examine the nature of possible intermolecular hydrogen bonds. Phase 1 is monoclinic, space group C2/m, with unit-cell dimensions of a = 9.073 (8), b = 7.077 (6), c = 5.597 (5) Å and β = 105.89 (1)°. The molecule adopts 2/m symmetry and all of the molecules are related by translation and thus have the same orientation. Phase 2 is also monoclinic but in space group P2(1)/n with unit-cell dimensions of a = 7.1305 (5), b = 5.7245 (4), c = 8.3760 (6) Å and β = 91.138 (2)°. In this phase, the molecule sits on an inversion center and the molecules within the unit cell adopt quite different orientations. In both phases, examination of the potential C—H⋯O hydrogen bonds around each of the independent oxygen atoms (one axial and the other equatorial) shows the general O⋯H patterns to be quite similar with each oxygen atom in contact with four neighboring H atoms, and each H atom contacting two neighboring O atoms. While none of the H⋯O contacts is particularly short (all are greater than 2.5 Å), each molecule has 32 such contacts that form an extensive intermolecular network. A (1)H NMR spectrum of the compound dissolved in DMSO shows a singlet of 8H at δ 3.677 which indicates that the C—H bonds are only moderately polarized by the single adjacent –SO(2)– moiety: strongly polarized C—H bonds have δ values in the 5–6 range [Li & Sammes (1983 ▸). J. Chem. Soc. Perkin Trans. 1, pp. 1303–1309]. The phase 1 crystal studied was non-merohedrally twinned. |
format | Online Article Text |
id | pubmed-6505583 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-65055832019-05-20 Comparison of the C—H⋯O bonding in two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide Harlow, Richard L. Oliver, Allen G. Baker, Jonathan M. Marshall, William J. Sammes, Michael P. Acta Crystallogr E Crystallogr Commun Research Communications The crystal structures of two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide, C(4)H(8)O(4)S(2), have been determined in order to examine the nature of possible intermolecular hydrogen bonds. Phase 1 is monoclinic, space group C2/m, with unit-cell dimensions of a = 9.073 (8), b = 7.077 (6), c = 5.597 (5) Å and β = 105.89 (1)°. The molecule adopts 2/m symmetry and all of the molecules are related by translation and thus have the same orientation. Phase 2 is also monoclinic but in space group P2(1)/n with unit-cell dimensions of a = 7.1305 (5), b = 5.7245 (4), c = 8.3760 (6) Å and β = 91.138 (2)°. In this phase, the molecule sits on an inversion center and the molecules within the unit cell adopt quite different orientations. In both phases, examination of the potential C—H⋯O hydrogen bonds around each of the independent oxygen atoms (one axial and the other equatorial) shows the general O⋯H patterns to be quite similar with each oxygen atom in contact with four neighboring H atoms, and each H atom contacting two neighboring O atoms. While none of the H⋯O contacts is particularly short (all are greater than 2.5 Å), each molecule has 32 such contacts that form an extensive intermolecular network. A (1)H NMR spectrum of the compound dissolved in DMSO shows a singlet of 8H at δ 3.677 which indicates that the C—H bonds are only moderately polarized by the single adjacent –SO(2)– moiety: strongly polarized C—H bonds have δ values in the 5–6 range [Li & Sammes (1983 ▸). J. Chem. Soc. Perkin Trans. 1, pp. 1303–1309]. The phase 1 crystal studied was non-merohedrally twinned. International Union of Crystallography 2019-04-05 /pmc/articles/PMC6505583/ /pubmed/31110789 http://dx.doi.org/10.1107/S2056989019004407 Text en © Harlow et al. 2019 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Communications Harlow, Richard L. Oliver, Allen G. Baker, Jonathan M. Marshall, William J. Sammes, Michael P. Comparison of the C—H⋯O bonding in two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide |
title | Comparison of the C—H⋯O bonding in two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide |
title_full | Comparison of the C—H⋯O bonding in two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide |
title_fullStr | Comparison of the C—H⋯O bonding in two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide |
title_full_unstemmed | Comparison of the C—H⋯O bonding in two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide |
title_short | Comparison of the C—H⋯O bonding in two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide |
title_sort | comparison of the c—h⋯o bonding in two crystalline phases of 1,4-dithiane 1,1,4,4-tetraoxide |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6505583/ https://www.ncbi.nlm.nih.gov/pubmed/31110789 http://dx.doi.org/10.1107/S2056989019004407 |
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