Cargando…

Identification of stable QTLs and candidate genes involved in anaerobic germination tolerance in rice via high-density genetic mapping and RNA-Seq

BACKGROUND: Anaerobic germination tolerance is an important trait for direct-seeded rice varieties. Understanding the genetic basis of anaerobic germination is a key for breeding direct-seeded rice varieties. RESULTS: In this study, a recombinant inbred line (RIL) population derived from a cross bet...

Descripción completa

Detalles Bibliográficos
Autores principales:	Yang, Jing, Sun, Kai, Li, Dongxiu, Luo, Lixin, Liu, Yongzhu, Huang, Ming, Yang, Guili, Liu, Hong, Wang, Hui, Chen, Zhiqiang, Guo, Tao
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2019
Materias:	Research Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6506967/ https://www.ncbi.nlm.nih.gov/pubmed/31072298 http://dx.doi.org/10.1186/s12864-019-5741-y

Ejemplares similares

High-density genetic mapping identified QTLs for anaerobic germination tolerance in rice
por: Liang, Wenhua, et al.
Publicado: (2022)

Mapping QTLs for anaerobic tolerance at germination and bud stages using new high density genetic map of rice
por: Yang, Jing, et al.
Publicado: (2022)

Identification of QTLs involved in cold tolerance during the germination and bud stages of rice (Oryza sativa L.) via a high-density genetic map
por: Yang, Jing, et al.
Publicado: (2020)

Dynamic genome-wide association analysis and identification of candidate genes involved in anaerobic germination tolerance in rice
por: Su, Ling, et al.
Publicado: (2021)

Identification of QTLs for Salt Tolerance at the Germination and Seedling Stages in Rice
por: Nakhla, Walid Raafat, et al.
Publicado: (2021)

Genetic Mapping of Anaerobic Germination-Associated QTLs Controlling Coleoptile Elongation in Rice
por: Hsu, Sheng-Kai, et al.
Publicado: (2015)

GWAS Combined with WGCNA of Transcriptome and Metabolome to Excavate Key Candidate Genes for Rice Anaerobic Germination
por: Li, Dandan, et al.
Publicado: (2023)

Quantitative Trait Locus Analysis of Seed Germination and Early Seedling Growth in Rice
por: Yang, Jing, et al.
Publicado: (2019)

Uncovering the Novel QTLs and Candidate Genes of Salt Tolerance in Rice with Linkage Mapping, RTM-GWAS, and RNA-seq
por: Kong, Weilong, et al.
Publicado: (2021)

Identification of Candidate Genes for Salinity and Anaerobic Tolerance at the Germination Stage in Rice by Genome-Wide Association Analyses
por: Islam, Mohammad Rafiqul, et al.
Publicado: (2022)

Selection of Candidate Genes Conferring Blast Resistance and Heat Tolerance in Rice through Integration of Meta-QTLs and RNA-Seq
por: Tian, Tian, et al.
Publicado: (2022)

Screening of potential donors for anaerobic stress tolerance during germination in rice
por: Mwakyusa, Lupakisyo, et al.
Publicado: (2023)

Mapping QTLs for cold tolerance at germination and the early seedling stage in rice (Oryza sativa L.)
por: Ranawake, Aloka Lanka, et al.
Publicado: (2014)

Deciphering Genetics Underlying Stable Anaerobic Germination in Rice: Phenotyping, QTL Identification, and Interaction Analysis
por: Ghosal, Sharmistha, et al.
Publicado: (2019)

Dynamic transcriptome and metabolome analyses of two types of rice during the seed germination and young seedling growth stages
por: Yang, Jing, et al.
Publicado: (2020)

Identification of candidate genes controlling chilling tolerance of rice in the cold region at the booting stage by BSA-Seq and RNA-Seq
por: Guo, Zhenhua, et al.
Publicado: (2020)

Genetic Mapping by Sequencing More Precisely Detects Loci Responsible for Anaerobic Germination Tolerance in Rice
por: Ignacio, John Carlos I., et al.
Publicado: (2021)

Tolerance of anaerobic conditions caused by flooding during germination and early growth in rice (Oryza sativa L.)
por: Miro, Berta, et al.
Publicado: (2013)

Enriched-GWAS and Transcriptome Analysis to Refine and Characterize a Major QTL for Anaerobic Germination Tolerance in Rice
por: Tnani, Hedia, et al.
Publicado: (2021)

QTL mapping for tolerance to anaerobic germination in rice from IR64 and the aus landrace Kharsu 80A
por: Baltazar, Miriam D., et al.
Publicado: (2019)

Genomic landscape of the OsTPP7 gene in its haplotype diversity and association with anaerobic germination tolerance in rice
por: Aung, Kyaw Myo, et al.
Publicado: (2023)

Identification of cold tolerance QTLs at the bud burst stage in 211 rice landraces by GWAS
por: Li, Caijing, et al.
Publicado: (2021)

NILs of Cold Tolerant Japonica Cultivar Exhibited New QTLs for Mineral Elements in Rice
por: Ali, Muhammad Kazim, et al.
Publicado: (2021)

Characterization of QTLs and Candidate Genes for Days to Heading in Rice Recombinant Inbred Lines
por: Mo, Youngjun, et al.
Publicado: (2020)

Association Mapping and Functional Analysis of Rice Cold Tolerance QTLs at the Bud Burst Stage
por: Wang, Dan, et al.
Publicado: (2021)

QTLs and Candidate Loci Associated with Drought Tolerance Traits of Kaybonnet x ZHE733 Recombinant Inbred Lines Rice Population
por: Dwiningsih, Yheni, et al.
Publicado: (2023)

An epigenetic pathway in rice connects genetic variation to anaerobic germination and seedling establishment
por: Castano-Duque, Lina, et al.
Publicado: (2021)

Genome-Wide Association Study Reveals Novel QTLs and Candidate Genes for Grain Number in Rice
por: Li, Peiyuan, et al.
Publicado: (2022)

Detailed Genetic Analysis for Identifying QTLs Associated with Drought Tolerance at Seed Germination and Seedling Stages in Barley
por: Moursi, Yasser S., et al.
Publicado: (2020)

Salt tolerance QTLs of an endemic rice landrace, Horkuch at seedling and reproductive stages
por: Haque, Taslima, et al.
Publicado: (2022)

Regional Association Analysis of MetaQTLs Delineates Candidate Grain Size Genes in Rice
por: Daware, Anurag V., et al.
Publicado: (2017)

Identification of Salt Tolerance Related Candidate Genes in ‘Sea Rice 86’ at the Seedling and Reproductive Stages Using QTL-Seq and BSA-Seq
por: Gao, Qinmei, et al.
Publicado: (2023)

Mapping of Quantitative Trait Locus (QTLs) that Contribute to Germination and Early Seedling Drought Tolerance in the Interspecific Cross Setaria italica×Setaria viridis
por: Qie, Lufeng, et al.
Publicado: (2014)

Novel method for evaluation of anaerobic germination in rice and its application to diverse genetic collections
por: Kuya, Noriyuki, et al.
Publicado: (2019)

Comparative transcriptomic analysis of germinating rice seedlings to individual and combined anaerobic and cold stress
por: Thapa, Ranjita, et al.
Publicado: (2023)

Molecular microbial ecology of stable versus failing rice straw anaerobic digesters
por: Zealand, Andrew M., et al.
Publicado: (2019)

Improvement of rice blast resistance by developing monogenic lines, two-gene pyramids and three-gene pyramid through MAS
por: Xiao, Wuming, et al.
Publicado: (2019)

Development of a core SNP arrays based on the KASP method for molecular breeding of rice
por: Yang, Guili, et al.
Publicado: (2019)

Identification of QTN and candidate genes for Salinity Tolerance at the Germination and Seedling Stages in Rice by Genome-Wide Association Analyses
por: Naveed, Shahzad Amir, et al.
Publicado: (2018)

Identification of main-effect quantitative trait loci (QTLs) for low-temperature stress tolerance germination- and early seedling vigor-related traits in rice (Oryza sativa L.)
por: Najeeb, S., et al.
Publicado: (2020)

Cannot write session to /tmp/vufind_sessions/sess_tbnob6mjki8q13cl1ojtee89eo