Cargando…

Validity of an NGS-based multiple gene panel in identifying actionable mutations for patients with NSCLC in a Chinese hospital

Non-small cell lung cancer (NSCLC) is the most common type of lung cancer. A number of targeted therapies have been approved for clinical use or are in clinical trials. Next generation sequencing (NGS) is widely applied in the identification of actionable genomic alterations and enables personalized...

Descripción completa

Detalles Bibliográficos
Autores principales: Cao, Wei, Yan, Chenghai, Wang, Hailong, Tang, Tom, Wang, Haifeng, Liu, Dujuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: D.A. Spandidos 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6507321/
https://www.ncbi.nlm.nih.gov/pubmed/31186761
http://dx.doi.org/10.3892/ol.2019.10265
_version_ 1783417009258627072
author Cao, Wei
Yan, Chenghai
Wang, Hailong
Tang, Tom
Wang, Haifeng
Liu, Dujuan
author_facet Cao, Wei
Yan, Chenghai
Wang, Hailong
Tang, Tom
Wang, Haifeng
Liu, Dujuan
author_sort Cao, Wei
collection PubMed
description Non-small cell lung cancer (NSCLC) is the most common type of lung cancer. A number of targeted therapies have been approved for clinical use or are in clinical trials. Next generation sequencing (NGS) is widely applied in the identification of actionable genomic alterations and enables personalized cancer therapy for patients. Several multiple-gene panels are available in China for the practice of precision medicine-based cancer therapy. However, the efficiency of these panels requires evaluation. The current study investigated 23 NSCLC samples using a custom designed panel of complete coding regions of ~180 cancer driver genes (FD-180) and whole exome sequencing for control samples, obtained from white blood cell samples. The results obtained suggested that actionable mutations with available targeted therapeutic options were identified in 69.6% of cases, including 60.9% of therapeutic targets recommended by the National Comprehensive Cancer Network guidelines. Furthermore, 8.7% of patients had a gene mutation that potentially qualified them for clinical trials or associated off-label therapies. As such, the results obtained in the current study demonstrated the reliability of the targeted NGS panel and its potential use for identifying actionable gene alterations and designing personalized therapies for patients with NSCLC.
format Online
Article
Text
id pubmed-6507321
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher D.A. Spandidos
record_format MEDLINE/PubMed
spelling pubmed-65073212019-06-11 Validity of an NGS-based multiple gene panel in identifying actionable mutations for patients with NSCLC in a Chinese hospital Cao, Wei Yan, Chenghai Wang, Hailong Tang, Tom Wang, Haifeng Liu, Dujuan Oncol Lett Articles Non-small cell lung cancer (NSCLC) is the most common type of lung cancer. A number of targeted therapies have been approved for clinical use or are in clinical trials. Next generation sequencing (NGS) is widely applied in the identification of actionable genomic alterations and enables personalized cancer therapy for patients. Several multiple-gene panels are available in China for the practice of precision medicine-based cancer therapy. However, the efficiency of these panels requires evaluation. The current study investigated 23 NSCLC samples using a custom designed panel of complete coding regions of ~180 cancer driver genes (FD-180) and whole exome sequencing for control samples, obtained from white blood cell samples. The results obtained suggested that actionable mutations with available targeted therapeutic options were identified in 69.6% of cases, including 60.9% of therapeutic targets recommended by the National Comprehensive Cancer Network guidelines. Furthermore, 8.7% of patients had a gene mutation that potentially qualified them for clinical trials or associated off-label therapies. As such, the results obtained in the current study demonstrated the reliability of the targeted NGS panel and its potential use for identifying actionable gene alterations and designing personalized therapies for patients with NSCLC. D.A. Spandidos 2019-06 2019-04-18 /pmc/articles/PMC6507321/ /pubmed/31186761 http://dx.doi.org/10.3892/ol.2019.10265 Text en Copyright: © Cao et al. This is an open access article distributed under the terms of the Creative Commons Attribution-NonCommercial-NoDerivs License (https://creativecommons.org/licenses/by-nc-nd/4.0/) , which permits use and distribution in any medium, provided the original work is properly cited, the use is non-commercial and no modifications or adaptations are made.
spellingShingle Articles
Cao, Wei
Yan, Chenghai
Wang, Hailong
Tang, Tom
Wang, Haifeng
Liu, Dujuan
Validity of an NGS-based multiple gene panel in identifying actionable mutations for patients with NSCLC in a Chinese hospital
title Validity of an NGS-based multiple gene panel in identifying actionable mutations for patients with NSCLC in a Chinese hospital
title_full Validity of an NGS-based multiple gene panel in identifying actionable mutations for patients with NSCLC in a Chinese hospital
title_fullStr Validity of an NGS-based multiple gene panel in identifying actionable mutations for patients with NSCLC in a Chinese hospital
title_full_unstemmed Validity of an NGS-based multiple gene panel in identifying actionable mutations for patients with NSCLC in a Chinese hospital
title_short Validity of an NGS-based multiple gene panel in identifying actionable mutations for patients with NSCLC in a Chinese hospital
title_sort validity of an ngs-based multiple gene panel in identifying actionable mutations for patients with nsclc in a chinese hospital
topic Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6507321/
https://www.ncbi.nlm.nih.gov/pubmed/31186761
http://dx.doi.org/10.3892/ol.2019.10265
work_keys_str_mv AT caowei validityofanngsbasedmultiplegenepanelinidentifyingactionablemutationsforpatientswithnsclcinachinesehospital
AT yanchenghai validityofanngsbasedmultiplegenepanelinidentifyingactionablemutationsforpatientswithnsclcinachinesehospital
AT wanghailong validityofanngsbasedmultiplegenepanelinidentifyingactionablemutationsforpatientswithnsclcinachinesehospital
AT tangtom validityofanngsbasedmultiplegenepanelinidentifyingactionablemutationsforpatientswithnsclcinachinesehospital
AT wanghaifeng validityofanngsbasedmultiplegenepanelinidentifyingactionablemutationsforpatientswithnsclcinachinesehospital
AT liudujuan validityofanngsbasedmultiplegenepanelinidentifyingactionablemutationsforpatientswithnsclcinachinesehospital