Cargando…

SSR identification and marker development for sago palm based on NGS genome data

Sago palm (Metroxylon sagu Rottb.) is one of the most productive carbohydrate-producing crops. Unfortunately, only limited information regarding sago palm genetics is available. This study aimed to develop simple sequence repeat (SSR) markers using sago palm NGS genomic data and use these markers to...

Descripción completa

Detalles Bibliográficos
Autores principales:	Purwoko, Devit, Cartealy, Imam Civi, Tajuddin, Teuku, Dinarti, Diny, Sudarsono, Sudarsono
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Japanese Society of Breeding 2019
Materias:	Research Paper
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6507712/ https://www.ncbi.nlm.nih.gov/pubmed/31086478 http://dx.doi.org/10.1270/jsbbs.18061

Ejemplares similares

Dataset of de novo transcriptome assembly of Rhizome in Curcuma aeruginosa Roxb
por: Purwoko, Devit, et al.
Publicado: (2023)

Metagenomic data of microbial in natural empty fruit bunches degradation
por: Purwoko, Devit, et al.
Publicado: (2022)

Defense response changes in roots of oil palm (Elaeis guineensis Jacq.) seedlings after internal symptoms of Ganoderma boninense Pat. infection
por: Faizah, Rokhana, et al.
Publicado: (2022)

Transcriptome dataset of sago palm in peat soil
por: Yan, Wei-Jie, et al.
Publicado: (2022)

First high-quality genome assembly data of sago palm (Metroxylon sagu Rottboll)
por: Lim, Leonard Whye Kit, et al.
Publicado: (2022)

Isolation and Identification of Plant Growth Promoting Rhizobacteria from Sago Palm (Metroxylon sagu, Rottb.)
por: Lihan, Samuel, et al.
Publicado: (2021)

Balancing the Growth Performance and Nutritional Value of Edible Farm-Raised Sago Palm Weevil (Rhynchophorus ferregineus) Larvae by Feeding Various Plant Supplemented-Sago Palm Trunk Diets
por: Promwee, Athakorn, et al.
Publicado: (2023)

Experimental data on the properties of pelletization of palm kernel shell using sago starch and sodium acetate
por: Halim, Siti Abdul, et al.
Publicado: (2020)

Remediating lapses in professionalism among undergraduate pre-clinical medical students in an Asian Institution: a multimodal approach
por: Findyartini, Ardi, et al.
Publicado: (2018)

Identification and characterization of gene-based SSR markers in date palm (Phoenix dactylifera L.)
por: Zhao, Yongli, et al.
Publicado: (2012)

The Sago Trees
Publicado: (1882)

Mining and Development of Novel SSR Markers Using Next Generation Sequencing (NGS) Data in Plants
por: Taheri, Sima, et al.
Publicado: (2018)

Sago-Type Palms Were an Important Plant Food Prior to Rice in Southern Subtropical China
por: Yang, Xiaoyan, et al.
Publicado: (2013)

The Dietetic Value of Sago
por: Mukherji, S.
Publicado: (1923)

Elaeis oleifera Genomic-SSR Markers: Exploitation in Oil Palm Germplasm Diversity and Cross-Amplification in Arecaceae
por: Zaki, Noorhariza Mohd, et al.
Publicado: (2012)

Identification of QTLs Associated with Callogenesis and Embryogenesis in Oil Palm Using Genetic Linkage Maps Improved with SSR Markers
por: Ting, Ngoot-Chin, et al.
Publicado: (2013)

RNASeq data from Indonesian recalcitrant and non-recalcitrant rice varieties on anther culture
por: Fatimah, Siti, et al.
Publicado: (2022)

SSR2Marker: an integrated pipeline for identification of SSR markers within any two given genome-scale sequences
por: Yue, Junyang, et al.
Publicado: (2022)

Genome survey sequencing and identification of genomic SSR markers for Rhododendron micranthum
por: Zhou, Xiao-jun, et al.
Publicado: (2020)

Waterlogged Conditions Influence the Nitrogen, Phosphorus, Potassium, and Sugar Distribution in Sago Palm (Metroxylon sagu Rottb.) at Seedling Stages
por: Azhar, Aidil, et al.
Publicado: (2022)

Draft genome sequence data of maqui (Aristotelia chilensis) and identification of SSR markers
por: Bastías, Adriana, et al.
Publicado: (2019)

The impact of Ramadan fasting on glucose variability in type 2 diabetes mellitus patients on oral anti diabetic agents
por: Harbuwono, Dante S., et al.
Publicado: (2020)

Institutional Reconstruction of Promoting and Maintaining the Level of Compliance with Health Protocols in Indonesia during the Pandemic
por: Adnan, Ricardi S., et al.
Publicado: (2022)

Sago‐like appearance of pleura in Tuberculosis
por: Dhungana, Ashesh, et al.
Publicado: (2020)

Assessment of Wild Rocket (Diplotaxis tenuifolia (L.) DC.) Germplasm Accessions by NGS Identified SSR and SNP Markers
por: Reis, João M., et al.
Publicado: (2022)

Characterization of SSR genomic abundance and identification of SSR markers for population genetics in Chinese jujube (Ziziphus jujuba Mill.)
por: Fu, Peng-cheng, et al.
Publicado: (2016)

Institutional Divergence of Digital Item Bank Management in Bureaucratic Hybridization: An Application of SSM Based Multi-Method
por: Muhammaditya, Nur, et al.
Publicado: (2021)

Genome survey sequencing of Atractylodes lancea and identification of its SSR markers
por: Shan, Tingyu, et al.
Publicado: (2020)

Predicting metabolic pathway membership with deep neural networks by integrating sequential and ontology information
por: Cartealy, Imam, et al.
Publicado: (2021)

Data of 10 SSR markers for genomes of homo sapiens and monkeys
por: Reddy, K.K.V.V.V.S., et al.
Publicado: (2017)

tropiTree: An NGS-Based EST-SSR Resource for 24 Tropical Tree Species
por: Russell, Joanne R., et al.
Publicado: (2014)

Development of SSR Databases Available for Both NGS and Capillary Electrophoresis in Apple, Pear and Tea
por: Nishio, Sogo, et al.
Publicado: (2021)

Tylophorine Abrogates G2/M Arrest Induced by Doxorubicine and Promotes Increased Apoptosis in T47D Breast Cancer Cells
por: Pratama, Nofran Putra, et al.
Publicado: (2018)

Exploiting transcriptome data for the development and characterization of gene-based SSR markers related to cold tolerance in oil palm (Elaeis guineensis)
por: Xiao, Yong, et al.
Publicado: (2014)

Strawberry cultivar identification based on hypervariable SSR markers
por: Honjo, Masanori, et al.
Publicado: (2011)

Genetic diversity and parentage in farmer selections of cacao from Southern Sulawesi, Indonesia revealed by microsatellite markers
por: Dinarti, Diny, et al.
Publicado: (2015)

Developmenrt of EST-SSR and genomic-SSR markers to assess genetic diversity in Jatropha Curcas L.
por: Wen, Mingfu, et al.
Publicado: (2010)

Development and Characterization of Polymorphic EST-SSR and Genomic SSR Markers for Tibetan Annual Wild Barley
por: Zhang, Mian, et al.
Publicado: (2014)

Effects of Annealing on the Properties of Gamma-Irradiated Sago Starch
por: Lee, Jau-Shya, et al.
Publicado: (2022)

Draft genome sequence, annotation, and SSR mining data of Elaeidobius kamerunicus Faust., an essential oil palm pollinating weevil
por: Apriyanto, Ardha, et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_s6mdbkr55a0l5tmftdorgd4n01