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Functional dissection of the ARGONAUTE7 promoter

ARGONAUTES are the central effector proteins of RNA silencing which bind target transcripts in a small RNA‐guided manner. Arabidopsis thaliana has 10 ARGONAUTE (AGO) genes, with specialized roles in RNA‐directed DNA methylation, post‐transcriptional gene silencing, and antiviral defense. To better u...

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Autores principales: Hoyer, J. Steen, Pruneda‐Paz, Jose L., Breton, Ghislain, Hassert, Mariah A., Holcomb, Emily E., Fowler, Halley, Bauer, Kaylyn M., Mreen, Jacob, Kay, Steve A., Carrington, James C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6508778/
https://www.ncbi.nlm.nih.gov/pubmed/31245750
http://dx.doi.org/10.1002/pld3.102
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author Hoyer, J. Steen
Pruneda‐Paz, Jose L.
Breton, Ghislain
Hassert, Mariah A.
Holcomb, Emily E.
Fowler, Halley
Bauer, Kaylyn M.
Mreen, Jacob
Kay, Steve A.
Carrington, James C.
author_facet Hoyer, J. Steen
Pruneda‐Paz, Jose L.
Breton, Ghislain
Hassert, Mariah A.
Holcomb, Emily E.
Fowler, Halley
Bauer, Kaylyn M.
Mreen, Jacob
Kay, Steve A.
Carrington, James C.
author_sort Hoyer, J. Steen
collection PubMed
description ARGONAUTES are the central effector proteins of RNA silencing which bind target transcripts in a small RNA‐guided manner. Arabidopsis thaliana has 10 ARGONAUTE (AGO) genes, with specialized roles in RNA‐directed DNA methylation, post‐transcriptional gene silencing, and antiviral defense. To better understand specialization among AGO genes at the level of transcriptional regulation we tested a library of 1497 transcription factors for binding to the promoters of AGO1,AGO10, and AGO7 using yeast 1‐hybrid assays. A ranked list of candidate DNA‐binding TFs revealed binding of the AGO7 promoter by a number of proteins in two families: the miR156‐regulated SPL family and the miR319‐regulated TCP family, both of which have roles in developmental timing and leaf morphology. Possible functions for SPL and TCP binding are unclear: we showed that these binding sites are not required for the polar expression pattern of AGO7, nor for the function of AGO7 in leaf shape. Normal AGO7 transcription levels and function appear to depend instead on an adjacent 124‐bp region. Progress in understanding the structure of this promoter may aid efforts to understand how the conserved AGO7‐triggered TAS3 pathway functions in timing and polarity.
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spelling pubmed-65087782019-06-26 Functional dissection of the ARGONAUTE7 promoter Hoyer, J. Steen Pruneda‐Paz, Jose L. Breton, Ghislain Hassert, Mariah A. Holcomb, Emily E. Fowler, Halley Bauer, Kaylyn M. Mreen, Jacob Kay, Steve A. Carrington, James C. Plant Direct Original Research ARGONAUTES are the central effector proteins of RNA silencing which bind target transcripts in a small RNA‐guided manner. Arabidopsis thaliana has 10 ARGONAUTE (AGO) genes, with specialized roles in RNA‐directed DNA methylation, post‐transcriptional gene silencing, and antiviral defense. To better understand specialization among AGO genes at the level of transcriptional regulation we tested a library of 1497 transcription factors for binding to the promoters of AGO1,AGO10, and AGO7 using yeast 1‐hybrid assays. A ranked list of candidate DNA‐binding TFs revealed binding of the AGO7 promoter by a number of proteins in two families: the miR156‐regulated SPL family and the miR319‐regulated TCP family, both of which have roles in developmental timing and leaf morphology. Possible functions for SPL and TCP binding are unclear: we showed that these binding sites are not required for the polar expression pattern of AGO7, nor for the function of AGO7 in leaf shape. Normal AGO7 transcription levels and function appear to depend instead on an adjacent 124‐bp region. Progress in understanding the structure of this promoter may aid efforts to understand how the conserved AGO7‐triggered TAS3 pathway functions in timing and polarity. John Wiley and Sons Inc. 2019-01-02 /pmc/articles/PMC6508778/ /pubmed/31245750 http://dx.doi.org/10.1002/pld3.102 Text en © 2019 The Authors. Plant Direct published by American Society of Plant Biologists, Society for Experimental Biology and John Wiley & Sons Ltd. This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Research
Hoyer, J. Steen
Pruneda‐Paz, Jose L.
Breton, Ghislain
Hassert, Mariah A.
Holcomb, Emily E.
Fowler, Halley
Bauer, Kaylyn M.
Mreen, Jacob
Kay, Steve A.
Carrington, James C.
Functional dissection of the ARGONAUTE7 promoter
title Functional dissection of the ARGONAUTE7 promoter
title_full Functional dissection of the ARGONAUTE7 promoter
title_fullStr Functional dissection of the ARGONAUTE7 promoter
title_full_unstemmed Functional dissection of the ARGONAUTE7 promoter
title_short Functional dissection of the ARGONAUTE7 promoter
title_sort functional dissection of the argonaute7 promoter
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6508778/
https://www.ncbi.nlm.nih.gov/pubmed/31245750
http://dx.doi.org/10.1002/pld3.102
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