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Crystal structure of NiFe(CO)(5)[tris(pyridyl­meth­yl)aza­phosphatrane]: a synthetic mimic of the NiFe hydrogenase active site incorporating a pendant pyridine base

The reaction of Ni(TPAP)(COD) {where TPAP = [(NC(5)H(4))CH(2)](3)P(NC(2)H(4))(3)N} with Fe(CO)(5) resulted in the isolation of the title heterobimetallic NiFe(TPAP)(CO)(5) complex di-μ-carbonyl-tricarbon­yl[2,8,9-tris­(pyridin-2-yl­meth­yl)-2,5,8,9-tetra­aza-1-phosphabi­cyclo­[3.3.3]undeca­ne]ironni...

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Detalles Bibliográficos
Autores principales: Sutthirat, Natwara, Ziller, Joseph W., Yang, Jenny Y., Thammavongsy, Zachary
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6509684/
https://www.ncbi.nlm.nih.gov/pubmed/31161052
http://dx.doi.org/10.1107/S2056989019003256
Descripción
Sumario:The reaction of Ni(TPAP)(COD) {where TPAP = [(NC(5)H(4))CH(2)](3)P(NC(2)H(4))(3)N} with Fe(CO)(5) resulted in the isolation of the title heterobimetallic NiFe(TPAP)(CO)(5) complex di-μ-carbonyl-tricarbon­yl[2,8,9-tris­(pyridin-2-yl­meth­yl)-2,5,8,9-tetra­aza-1-phosphabi­cyclo­[3.3.3]undeca­ne]ironnickel, [FeNi(C(24)H(30)N(7)P)(CO)(5)]. Characterization of the complex by (1)H and (31)P NMR as well as IR spectroscopy are presented. The structure of NiFe(TPAP)(CO)(5) reveals three terminally bound CO mol­ecules on Fe(0), two bridging CO mol­ecules between Ni(0) and Fe(0), and TPAP coordinated to Ni(0). The Ni—Fe bond length is 2.4828 (4) Å, similar to that of the reduced form of the active site of NiFe hydrogenase (∼2.5 Å). Additionally, a proximal pendant base from one of the non-coordinating pyridine groups of TPAP is also present. Although involvement of a pendant base has been cited in the mechanism of NiFe hydrogenase, this moiety has yet to be incorporated in a structurally characterized synthetic mimic with key structural motifs (terminally bound CO or CN ligands on Fe). Thus, the title complex NiFe(TPAP)(CO)(5) is an unique synthetic model for NiFe hydrogenase. In the crystal, the complex mol­ecules are linked by C—H⋯O hydrogen bonds, forming undulating layers parallel to (100). Within the layers, there are offset π–π [inter­centroid distance = 3.2739 (5) Å] and C—H⋯π inter­actions present. The layers are linked by further C—H⋯π inter­actions, forming a supra­molecular framework.