Cargando…

Visualization of unstained DNA nanostructures with advanced in-focus phase contrast TEM techniques

Over the last few years, tremendous progress has been made in visualizing biologically important macromolecules using transmission electron microscopy (TEM) and understanding their structure-function relation. Yet, despite the importance of DNA in all forms of life, TEM visualization of individual D...

Descripción completa

Detalles Bibliográficos
Autores principales: Kabiri, Yoones, Ravelli, Raimond B. G., Lehnert, Tibor, Qi, Haoyuan, Katan, Allard J., Roest, Natascha, Kaiser, Ute, Dekker, Cees, Peters, Peter J., Zandbergen, Henny
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6510773/
https://www.ncbi.nlm.nih.gov/pubmed/31076614
http://dx.doi.org/10.1038/s41598-019-43687-5
_version_ 1783417464436031488
author Kabiri, Yoones
Ravelli, Raimond B. G.
Lehnert, Tibor
Qi, Haoyuan
Katan, Allard J.
Roest, Natascha
Kaiser, Ute
Dekker, Cees
Peters, Peter J.
Zandbergen, Henny
author_facet Kabiri, Yoones
Ravelli, Raimond B. G.
Lehnert, Tibor
Qi, Haoyuan
Katan, Allard J.
Roest, Natascha
Kaiser, Ute
Dekker, Cees
Peters, Peter J.
Zandbergen, Henny
author_sort Kabiri, Yoones
collection PubMed
description Over the last few years, tremendous progress has been made in visualizing biologically important macromolecules using transmission electron microscopy (TEM) and understanding their structure-function relation. Yet, despite the importance of DNA in all forms of life, TEM visualization of individual DNA molecules in its native unlabeled form has remained extremely challenging. Here, we present high-contrast images of unstained single-layer DNA nanostructures that were obtained using advanced in-focus phase contrast TEM techniques. These include sub-Ångstrom low voltage electron microscopy (SALVE), the use of a volta-potential phase plate (VPP), and dark-field (DF) microscopy. We discuss the advantages and drawbacks of these techniques for broad applications in structural biology and materials science.
format Online
Article
Text
id pubmed-6510773
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Nature Publishing Group UK
record_format MEDLINE/PubMed
spelling pubmed-65107732019-05-23 Visualization of unstained DNA nanostructures with advanced in-focus phase contrast TEM techniques Kabiri, Yoones Ravelli, Raimond B. G. Lehnert, Tibor Qi, Haoyuan Katan, Allard J. Roest, Natascha Kaiser, Ute Dekker, Cees Peters, Peter J. Zandbergen, Henny Sci Rep Article Over the last few years, tremendous progress has been made in visualizing biologically important macromolecules using transmission electron microscopy (TEM) and understanding their structure-function relation. Yet, despite the importance of DNA in all forms of life, TEM visualization of individual DNA molecules in its native unlabeled form has remained extremely challenging. Here, we present high-contrast images of unstained single-layer DNA nanostructures that were obtained using advanced in-focus phase contrast TEM techniques. These include sub-Ångstrom low voltage electron microscopy (SALVE), the use of a volta-potential phase plate (VPP), and dark-field (DF) microscopy. We discuss the advantages and drawbacks of these techniques for broad applications in structural biology and materials science. Nature Publishing Group UK 2019-05-10 /pmc/articles/PMC6510773/ /pubmed/31076614 http://dx.doi.org/10.1038/s41598-019-43687-5 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Kabiri, Yoones
Ravelli, Raimond B. G.
Lehnert, Tibor
Qi, Haoyuan
Katan, Allard J.
Roest, Natascha
Kaiser, Ute
Dekker, Cees
Peters, Peter J.
Zandbergen, Henny
Visualization of unstained DNA nanostructures with advanced in-focus phase contrast TEM techniques
title Visualization of unstained DNA nanostructures with advanced in-focus phase contrast TEM techniques
title_full Visualization of unstained DNA nanostructures with advanced in-focus phase contrast TEM techniques
title_fullStr Visualization of unstained DNA nanostructures with advanced in-focus phase contrast TEM techniques
title_full_unstemmed Visualization of unstained DNA nanostructures with advanced in-focus phase contrast TEM techniques
title_short Visualization of unstained DNA nanostructures with advanced in-focus phase contrast TEM techniques
title_sort visualization of unstained dna nanostructures with advanced in-focus phase contrast tem techniques
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6510773/
https://www.ncbi.nlm.nih.gov/pubmed/31076614
http://dx.doi.org/10.1038/s41598-019-43687-5
work_keys_str_mv AT kabiriyoones visualizationofunstaineddnananostructureswithadvancedinfocusphasecontrasttemtechniques
AT ravelliraimondbg visualizationofunstaineddnananostructureswithadvancedinfocusphasecontrasttemtechniques
AT lehnerttibor visualizationofunstaineddnananostructureswithadvancedinfocusphasecontrasttemtechniques
AT qihaoyuan visualizationofunstaineddnananostructureswithadvancedinfocusphasecontrasttemtechniques
AT katanallardj visualizationofunstaineddnananostructureswithadvancedinfocusphasecontrasttemtechniques
AT roestnatascha visualizationofunstaineddnananostructureswithadvancedinfocusphasecontrasttemtechniques
AT kaiserute visualizationofunstaineddnananostructureswithadvancedinfocusphasecontrasttemtechniques
AT dekkercees visualizationofunstaineddnananostructureswithadvancedinfocusphasecontrasttemtechniques
AT peterspeterj visualizationofunstaineddnananostructureswithadvancedinfocusphasecontrasttemtechniques
AT zandbergenhenny visualizationofunstaineddnananostructureswithadvancedinfocusphasecontrasttemtechniques