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A Novel Bioelectronic Reporter System in Living Cells Tested with a Synthetic Biological Comparator

As the fields of biotechnology and synthetic biology expand, cheap and sensitive tools are needed to measure increasingly complicated genetic circuits. In order to bypass some drawbacks of optical fluorescent reporting systems, we have designed and created a co-culture microbial fuel cell (MFC) syst...

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Detalles Bibliográficos
Autores principales: Zeng, Ji, Banerjee, Areen, Kim, Jaewook, Deng, Yijie, Chapman, Tim W., Daniel, Ramez, Sarpeshkar, Rahul
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6513987/
https://www.ncbi.nlm.nih.gov/pubmed/31086248
http://dx.doi.org/10.1038/s41598-019-43771-w
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author Zeng, Ji
Banerjee, Areen
Kim, Jaewook
Deng, Yijie
Chapman, Tim W.
Daniel, Ramez
Sarpeshkar, Rahul
author_facet Zeng, Ji
Banerjee, Areen
Kim, Jaewook
Deng, Yijie
Chapman, Tim W.
Daniel, Ramez
Sarpeshkar, Rahul
author_sort Zeng, Ji
collection PubMed
description As the fields of biotechnology and synthetic biology expand, cheap and sensitive tools are needed to measure increasingly complicated genetic circuits. In order to bypass some drawbacks of optical fluorescent reporting systems, we have designed and created a co-culture microbial fuel cell (MFC) system for electronic reporting. This system leverages the syntrophic growth of Escheriachia. coli (E. coli) and an electrogenic bacterium Shewanella oneidensis MR-1 (S. oneidensis). The fermentative products of E. coli provide a carbon and electron source for S. oneidensis MR-1, which then reports on such activity electrically at the anode of the MFC. To further test the capability of electrical reporting of complicated synthetic circuits, a novel synthetic biological comparator was designed and tested with both fluorescent and electrical reporting systems. The results suggest that the electrical reporting system is a good alternative to commonly used optical fluorescent reporter systems since it is a non-toxic reporting system with a much wider dynamic range.
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spelling pubmed-65139872019-05-24 A Novel Bioelectronic Reporter System in Living Cells Tested with a Synthetic Biological Comparator Zeng, Ji Banerjee, Areen Kim, Jaewook Deng, Yijie Chapman, Tim W. Daniel, Ramez Sarpeshkar, Rahul Sci Rep Article As the fields of biotechnology and synthetic biology expand, cheap and sensitive tools are needed to measure increasingly complicated genetic circuits. In order to bypass some drawbacks of optical fluorescent reporting systems, we have designed and created a co-culture microbial fuel cell (MFC) system for electronic reporting. This system leverages the syntrophic growth of Escheriachia. coli (E. coli) and an electrogenic bacterium Shewanella oneidensis MR-1 (S. oneidensis). The fermentative products of E. coli provide a carbon and electron source for S. oneidensis MR-1, which then reports on such activity electrically at the anode of the MFC. To further test the capability of electrical reporting of complicated synthetic circuits, a novel synthetic biological comparator was designed and tested with both fluorescent and electrical reporting systems. The results suggest that the electrical reporting system is a good alternative to commonly used optical fluorescent reporter systems since it is a non-toxic reporting system with a much wider dynamic range. Nature Publishing Group UK 2019-05-13 /pmc/articles/PMC6513987/ /pubmed/31086248 http://dx.doi.org/10.1038/s41598-019-43771-w Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Zeng, Ji
Banerjee, Areen
Kim, Jaewook
Deng, Yijie
Chapman, Tim W.
Daniel, Ramez
Sarpeshkar, Rahul
A Novel Bioelectronic Reporter System in Living Cells Tested with a Synthetic Biological Comparator
title A Novel Bioelectronic Reporter System in Living Cells Tested with a Synthetic Biological Comparator
title_full A Novel Bioelectronic Reporter System in Living Cells Tested with a Synthetic Biological Comparator
title_fullStr A Novel Bioelectronic Reporter System in Living Cells Tested with a Synthetic Biological Comparator
title_full_unstemmed A Novel Bioelectronic Reporter System in Living Cells Tested with a Synthetic Biological Comparator
title_short A Novel Bioelectronic Reporter System in Living Cells Tested with a Synthetic Biological Comparator
title_sort novel bioelectronic reporter system in living cells tested with a synthetic biological comparator
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6513987/
https://www.ncbi.nlm.nih.gov/pubmed/31086248
http://dx.doi.org/10.1038/s41598-019-43771-w
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